RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SEMA3EO15041 775 aa10.86□□□□□ -0.67
CUX1-206ENST00000437600 SERPINC1P01008 464 aa10.86□□□□□ -0.67
CUX1-206ENST00000437600 KCNA3P22001 575 aa10.86□□□□□ -0.67
CUX1-206ENST00000437600 NLRP12P59046 1061 aa10.86□□□□□ -0.67
CUX1-206ENST00000437600 AKAP17AQ02040 695 aaKnown RBP10.86□□□□□ -0.67
CUX1-206ENST00000437600 KLHL10Q6JEL2 608 aa10.86□□□□□ -0.67
CUX1-206ENST00000437600 DPP8Q6V1X1 898 aaPredicted RBP10.86□□□□□ -0.67
CUX1-206ENST00000437600 SECISBP2LQ93073 1101 aaKnown RBP10.86□□□□□ -0.67
CUX1-206ENST00000437600 CSRNP2Q9H175 543 aa10.86□□□□□ -0.67
CUX1-206ENST00000437600 RNF41Q9H4P4 317 aaPredicted RBP10.86□□□□□ -0.67
CUX1-206ENST00000437600 DYNC1I1O14576 645 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 ALDH1B1P30837 517 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 STX17P56962 302 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 SEC23AQ15436 765 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 PKN1Q16512 942 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
CUX1-206ENST00000437600 NLGN2Q8NFZ4 835 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 CNKSR2Q8WXI2 1034 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 SPDYE4A6NLX3 237 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 SLURP2P0DP57 97 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 CFAP100Q494V2 611 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 ARMCX5Q6P1M9 558 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 KRBA2Q6ZNG9 492 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 KRI1Q8N9T8 703 aaKnown RBP10.85□□□□□ -0.67
CUX1-206ENST00000437600 WDR66Q8TBY9 1149 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 RASGRP4Q8TDF6 673 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 DHX58Q96C10 678 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 MRFAP1L1Q96HT8 127 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 HPSEQ9Y251 543 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 WDR19Q8NEZ3 1342 aa10.85□□□□□ -0.67
CUX1-206ENST00000437600 A0A087X0B3 334 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 TSPY2A6NKD2 308 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 POLD1P28340 1107 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 PLCD1P51178 756 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 CCZ1BP86790 482 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 CCZ1P86791 482 aaPredicted RBP10.84□□□□□ -0.67
CUX1-206ENST00000437600 FANCCQ00597 558 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 RESP18Q5W5W9 173 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 SRBD1Q8N5C6 995 aaKnown RBP10.84□□□□□ -0.67
CUX1-206ENST00000437600 DUOX1Q9NRD9 1551 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 DEXIO95424 95 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 TPM3P06753 285 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 PTGER2P43116 358 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 BTDP43251 543 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 SCNN1DP51172 638 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 UBASH3AP57075 661 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 PICALMQ13492 652 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 USP17L1Q7RTZ2 530 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 MTERF4Q7Z6M4 381 aaKnown RBP10.84□□□□□ -0.67
CUX1-206ENST00000437600 SP8Q8IXZ3 490 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 SLC16A10Q8TF71 515 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.677e-6■□□□□ 10
CUX1-206ENST00000437600 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 GOLGA8HP0CJ92 632 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 FMR1Q06787 632 aaKnown RBP eCLIP10.84□□□□□ -0.674e-6■■■■□ 21.6
CUX1-206ENST00000437600 TROAPQ12815 778 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 SARM1Q6SZW1 724 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 IQCA1Q86XH1 822 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 JMYQ8N9B5 988 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 PLIN2Q99541 437 aa10.84□□□□□ -0.67
CUX1-206ENST00000437600 PPP6R2O75170 966 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 ATP2B4P23634 1241 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 AOC3Q16853 763 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
CUX1-206ENST00000437600 CATIPQ7Z7H3 387 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 TEX2Q8IWB9 1127 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 EEF2KMTQ96G04 330 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 SAMSN1Q9NSI8 373 aaKnown RBP10.83□□□□□ -0.68
CUX1-206ENST00000437600 FBXO2Q9UK22 296 aaPredicted RBP10.83□□□□□ -0.68
CUX1-206ENST00000437600 MAPK8IP1Q9UQF2 711 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 SCN9AQ15858 1988 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 LRRC37AA6NMS7 1700 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 VWA3AA6NCI4 1184 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 CAVIN2O95810 425 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 SPTY2D1Q68D10 685 aaPredicted RBP10.83□□□□□ -0.68
CUX1-206ENST00000437600 PIK3AP1Q6ZUJ8 805 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 PRIMPOLQ96LW4 560 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 ZC3H12CQ9C0D7 883 aaKnown RBP10.83□□□□□ -0.68
CUX1-206ENST00000437600 BLZF1Q9H2G9 400 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.83□□□□□ -0.68
CUX1-206ENST00000437600 LTBP1Q14766 1721 aa10.83□□□□□ -0.68
CUX1-206ENST00000437600 G3V3G9 751 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 CDK11BP21127 795 aaKnown RBP10.82□□□□□ -0.68
CUX1-206ENST00000437600 MCM7P33993 719 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 TFAP4Q01664 338 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 DCAF8Q5TAQ9 597 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 TTLL6Q8N841 843 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 MED15Q96RN5 788 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 CCDC196A0A1B0GTZ2 297 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 CUTAO60888 179 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 PTPREP23469 700 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 CBX1P83916 185 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 PTPN14Q15678 1187 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 CEP135Q66GS9 1140 aa10.82□□□□□ -0.68
CUX1-206ENST00000437600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.82□□□□□ -0.686e-12■■■■■ 49.8
CUX1-206ENST00000437600 TMTC2Q8N394 836 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms