RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 TBX21Q9UL17 535 aa19.51■□□□□ 0.71
CPNE1-208ENST00000414711 LRRC37A2A6NM11 1700 aa19.51■□□□□ 0.71
CPNE1-208ENST00000414711 STRNO43815 780 aa19.5■□□□□ 0.71
CPNE1-208ENST00000414711 COBLO75128 1261 aa19.5■□□□□ 0.71
CPNE1-208ENST00000414711 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
CPNE1-208ENST00000414711 SH3RF3Q8TEJ3 882 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-208ENST00000414711 NSUN4Q96CB9 384 aaKnown RBP19.5■□□□□ 0.71
CPNE1-208ENST00000414711 SLC5A4Q9NY91 659 aa19.5■□□□□ 0.71
CPNE1-208ENST00000414711 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
CPNE1-208ENST00000414711 HERVK_113Q902F9 699 aa19.49■□□□□ 0.71
CPNE1-208ENST00000414711 KHSRPQ92945 711 aaKnown RBP eCLIP19.49■□□□□ 0.718e-8■■■□□ 15.7
CPNE1-208ENST00000414711 MOV10L1Q9BXT6 1211 aaKnown RBP19.49■□□□□ 0.71
CPNE1-208ENST00000414711 USP44Q9H0E7 712 aa19.49■□□□□ 0.71
CPNE1-208ENST00000414711 STARD7Q9NQZ5 370 aa19.49■□□□□ 0.71
CPNE1-208ENST00000414711 YBX2Q9Y2T7 364 aaKnown RBP19.49■□□□□ 0.71
CPNE1-208ENST00000414711 ROBO3Q96MS0 1386 aa19.48■□□□□ 0.71
CPNE1-208ENST00000414711 GH2P01242 217 aa19.48■□□□□ 0.71
CPNE1-208ENST00000414711 CSF2RAP15509 400 aa19.48■□□□□ 0.71
CPNE1-208ENST00000414711 USP14P54578 494 aa19.48■□□□□ 0.71
CPNE1-208ENST00000414711 ZNF365Q70YC5 407 aa19.48■□□□□ 0.71
CPNE1-208ENST00000414711 FOXP4Q8IVH2 680 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-208ENST00000414711 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-208ENST00000414711 ACRP10323 421 aa19.47■□□□□ 0.71
CPNE1-208ENST00000414711 IL15P40933 162 aaPredicted RBP19.47■□□□□ 0.71
CPNE1-208ENST00000414711 MAML3Q96JK9 1138 aa19.47■□□□□ 0.71
CPNE1-208ENST00000414711 NOL10Q9BSC4 688 aaKnown RBP19.47■□□□□ 0.71
CPNE1-208ENST00000414711 RAI14Q9P0K7 980 aa19.47■□□□□ 0.71
CPNE1-208ENST00000414711 GBF1Q92538 1859 aa19.47■□□□□ 0.71
CPNE1-208ENST00000414711 FLT1P17948 1338 aa19.47■□□□□ 0.71
CPNE1-208ENST00000414711 APBB1O00213 710 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 ERCC3P19447 782 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 PPP2R2DQ66LE6 453 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 MAPKAPK5Q8IW41 473 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 TMEM199Q8N511 208 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 SHCBP1Q8NEM2 672 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 NUP133Q8WUM0 1156 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 KIAA1683Q9H0B3 1180 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 RPAP3Q9H6T3 665 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-208ENST00000414711 NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 ZNF521Q96K83 1311 aa19.46■□□□□ 0.71
CPNE1-208ENST00000414711 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-208ENST00000414711 SMIM22K7EJ46 135 aa19.45■□□□□ 0.7
CPNE1-208ENST00000414711 ACLYP53396 1101 aa19.45■□□□□ 0.7
CPNE1-208ENST00000414711 TBC1D9Q6ZT07 1266 aa19.45■□□□□ 0.7
CPNE1-208ENST00000414711 LENG1Q96BZ8 264 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-208ENST00000414711 SPATC1LQ9H0A9 340 aa19.45■□□□□ 0.7
CPNE1-208ENST00000414711 MTIF3Q9H2K0 278 aaKnown RBP19.45■□□□□ 0.7
CPNE1-208ENST00000414711 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
CPNE1-208ENST00000414711 MROH7Q68CQ1 1323 aa19.45■□□□□ 0.7
CPNE1-208ENST00000414711 TLL1O43897 1013 aa19.44■□□□□ 0.7
CPNE1-208ENST00000414711 MVPQ14764 893 aaKnown RBP19.44■□□□□ 0.7
CPNE1-208ENST00000414711 PI16Q6UXB8 463 aa19.44■□□□□ 0.7
CPNE1-208ENST00000414711 WDR63Q8IWG1 891 aa19.44■□□□□ 0.7
CPNE1-208ENST00000414711 TGFBRAP1Q8WUH2 860 aa19.44■□□□□ 0.7
CPNE1-208ENST00000414711 TSEN34Q9BSV6 310 aaKnown RBP19.44■□□□□ 0.7
CPNE1-208ENST00000414711 AATFQ9NY61 560 aaKnown RBP eCLIP19.44■□□□□ 0.7
CPNE1-208ENST00000414711 HMG20BQ9P0W2 317 aa19.44■□□□□ 0.7
CPNE1-208ENST00000414711 COG5Q9UP83 839 aa19.44■□□□□ 0.7
CPNE1-208ENST00000414711 A0A0G2JMZ2 1700 aa19.44■□□□□ 0.7
CPNE1-208ENST00000414711 PRRC2BQ5JSZ5 2229 aaKnown RBP19.43■□□□□ 0.7
CPNE1-208ENST00000414711 SMCHD1A6NHR9 2005 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 ADAMTS4O75173 837 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 HLA-DOAP06340 250 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 PLCG2P16885 1265 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 TIMM10P62072 90 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 ABRAQ8N0Z2 381 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 XAGE2Q96GT9 111 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 PPP1R12CQ9BZL4 782 aa19.43■□□□□ 0.7
CPNE1-208ENST00000414711 FOCADQ5VW36 1801 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 CDK5RAP2Q96SN8 1893 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 A0A1B0GUL7 405 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 MOXD2PA6NHM9 499 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 PRR33A8MZF0 331 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 PI4K2BG5E9Z4 385 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 AKR1A1P14550 325 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 RAB3GAP1Q15042 981 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 SPATA5Q8NB90 893 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 ACER1Q8TDN7 264 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 MROH8Q9H579 483 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 IL23AQ9NPF7 189 aa19.42■□□□□ 0.7
CPNE1-208ENST00000414711 SAP30BPQ9UHR5 308 aaKnown RBP19.42■□□□□ 0.7
CPNE1-208ENST00000414711 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
CPNE1-208ENST00000414711 GTPBP6O43824 516 aaPredicted RBP19.41■□□□□ 0.7
CPNE1-208ENST00000414711 BAG3O95817 575 aa19.41■□□□□ 0.7
CPNE1-208ENST00000414711 RABGGTBP53611 331 aa19.41■□□□□ 0.7
CPNE1-208ENST00000414711 NHLH1Q02575 133 aa19.41■□□□□ 0.7
CPNE1-208ENST00000414711 MTCH2Q9Y6C9 303 aa19.41■□□□□ 0.7
CPNE1-208ENST00000414711 SYNRGQ9UMZ2 1314 aa19.41■□□□□ 0.7
CPNE1-208ENST00000414711 TRANK1O15050 2925 aa19.4■□□□□ 0.7
CPNE1-208ENST00000414711 TAL1P17542 331 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-208ENST00000414711 NCAPG2Q86XI2 1143 aa19.4■□□□□ 0.7
CPNE1-208ENST00000414711 MYOGP15173 224 aa19.39■□□□□ 0.69
CPNE1-208ENST00000414711 POU3F3P20264 500 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-208ENST00000414711 PLS1Q14651 629 aa19.39■□□□□ 0.69
CPNE1-208ENST00000414711 COG2Q14746 738 aa19.39■□□□□ 0.69
CPNE1-208ENST00000414711 TANGO6Q9C0B7 1094 aa19.39■□□□□ 0.69
CPNE1-208ENST00000414711 HOXC10Q9NYD6 342 aa19.39■□□□□ 0.69
CPNE1-208ENST00000414711 LRP2BPQ9P2M1 347 aa19.39■□□□□ 0.69
CPNE1-208ENST00000414711 CACNA1AO00555 2505 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms