RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 TMEM240Q5SV17 173 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 PRAMEF19Q5SWL8 479 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 GORABQ5T7V8 394 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 RASIP1Q5U651 963 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 NAA16Q6N069 864 aaPredicted RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 PSRC1Q6PGN9 363 aaPredicted RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 TBC1D9Q6ZT07 1266 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZNF365Q70YC5 407 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 C16orf59Q7L2K0 433 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ANKRD33Q7Z3H0 272 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 TTC6Q86TZ1 520 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ALYREFQ86V81 257 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 METTL16Q86W50 562 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MAPKAPK5Q8IW41 473 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 TMEM199Q8N511 208 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MB21D1Q8N884 522 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 SPATA5Q8NB90 893 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 SH3RF3Q8TEJ3 882 aaPredicted RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZNF384Q8TF68 577 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 TGFBRAP1Q8WUH2 860 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 XAGE2Q96GT9 111 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MAML3Q96JK9 1138 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 GLT1D1Q96MS3 346 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 NEUROD6Q96NK8 337 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 TSEN34Q9BSV6 310 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MOV10L1Q9BXT6 1211 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 SPATC1LQ9H0A9 340 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 KIAA1683Q9H0B3 1180 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MTIF3Q9H2K0 278 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MROH8Q9H579 483 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 RPAP3Q9H6T3 665 aaPredicted RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 DNAJC18Q9H819 358 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 CABP5Q9NP86 173 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 COPRSQ9NQ92 184 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 AATFQ9NY61 560 aaKnown RBP eCLIP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 HMG20BQ9P0W2 317 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 BTBD7Q9P203 1132 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 SERPINB13Q9UIV8 391 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 PALD1Q9ULE6 856 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 TPRP12270 2363 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 EYSQ5T1H1 3165 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ELP1O95163 1332 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 FLT1P17948 1338 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MROH7Q68CQ1 1323 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZNF521Q96K83 1311 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 CDH23Q9H251 3354 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 A0A1W2PQ45 241 aaPredicted RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 A0A1W2PQY0 241 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 MOXD2PA6NHM9 499 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 ERC2O15083 957 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 TLR3O15455 904 aaKnown RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 GTPBP6O43824 516 aaPredicted RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 ADAMTS4O75173 837 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLC25A27O95847 323 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 FGBP02675 491 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 UQCRFS1P1P0C7P4 283 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 ACRP10323 421 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 AKR1A1P14550 325 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 CSF2RAP15509 400 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 POU3F3P20264 500 aaPredicted RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARID4AP29374 1257 aaPredicted RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 DSG3P32926 999 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 CDK7P50613 346 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 KCNQ1P51787 676 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 ACLYP53396 1101 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 TFF2Q03403 129 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 TFCP2Q12800 502 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 PLS1Q14651 629 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 KCTD2Q14681 263 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 ABCB5Q2M3G0 1257 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 SHROOM1Q2M3G4 852 aaPredicted RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 CERKLQ49MI3 558 aaPredicted RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 PPP2R2DQ66LE6 453 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 TATDN1Q6P1N9 297 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 PI16Q6UXB8 463 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 NCAPG2Q86XI2 1143 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 CERS3Q8IU89 383 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 MICALL1Q8N3F8 863 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 MRPL50Q8N5N7 158 aaKnown RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 PCSK9Q8NBP7 692 aaKnown RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 ACER1Q8TDN7 264 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 VTI1AQ96AJ9 217 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 SNX27Q96L92 541 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 TINF2Q9BSI4 451 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 PPP1R12CQ9BZL4 782 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 TANGO6Q9C0B7 1094 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 EHD4Q9H223 541 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 NKX2-4Q9H2Z4 354 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 SPC25Q9HBM1 224 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 SAP30BPQ9UHR5 308 aaKnown RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 TBX21Q9UL17 535 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM184BQ9ULE4 1060 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 COG5Q9UP83 839 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 PA2G4Q9UQ80 394 aaKnown RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 CNPY2Q9Y2B0 182 aa2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 DIS3Q9Y2L1 958 aaKnown RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 SPTBN5Q9NRC6 3674 aaKnown RBP2.9□□□□□ -1.95
RNU4-53P-201ENST00000410828 A0A0U1RQG5 324 aaPredicted RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 PRR33A8MZF0 331 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 PI4K2BG5E9Z4 385 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms