RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ONECUT3O60422 494 aaPredicted RBP17.62■□□□□ 0.41
CPSF7-202ENST00000394888 NOVP48745 357 aa17.62■□□□□ 0.41
CPSF7-202ENST00000394888 DIXDC1Q155Q3 683 aa17.62■□□□□ 0.41
CPSF7-202ENST00000394888 TPD52L1Q16890 204 aaPredicted RBP17.62■□□□□ 0.41
CPSF7-202ENST00000394888 ENOX1Q8TC92 643 aaKnown RBP17.62■□□□□ 0.41
CPSF7-202ENST00000394888 CCNL1Q9UK58 526 aaPredicted RBP17.62■□□□□ 0.41
CPSF7-202ENST00000394888 CDKAL1Q5VV42 579 aa17.62■□□□□ 0.41
CPSF7-202ENST00000394888 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
CPSF7-202ENST00000394888 CCDC150Q8NCX0 1101 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 PSDA5PKW4 1024 aaPredicted RBP17.61■□□□□ 0.41
CPSF7-202ENST00000394888 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
CPSF7-202ENST00000394888 NR1I3Q14994 352 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 CATIPQ7Z7H3 387 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 MYH4Q9Y623 1939 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 GRAPQ13588 217 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 SLC4A8Q2Y0W8 1093 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 SLC44A5Q8NCS7 719 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
CPSF7-202ENST00000394888 PAXBP1Q9Y5B6 917 aa17.61■□□□□ 0.41
CPSF7-202ENST00000394888 EDIL3O43854 480 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 SLFN14P0C7P3 912 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 PPP4CP60510 307 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 PRR5LQ6MZQ0 368 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 MAP7D2Q96T17 732 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 SCG2P13521 617 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 UBASH3AP57075 661 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 GPSM2P81274 684 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 HSP90AA4PQ58FG1 418 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 PDILTQ8N807 584 aa17.6■□□□□ 0.41
CPSF7-202ENST00000394888 A0A1B0GTH6 734 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 TRIM75PA6NK02 468 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 MYO1BO43795 1136 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 CALM1P0DP23 149 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 CALM2P0DP24 149 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 CALM3P0DP25 149 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 PTGDRQ13258 359 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 NAALADL2Q58DX5 795 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 TRIML1Q8N9V2 468 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 CCDC94Q9BW85 323 aaPredicted RBP17.59■□□□□ 0.41
CPSF7-202ENST00000394888 USP17L3A6NCW0 530 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 USP17L4A6NCW7 530 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 CHAF1AQ13111 956 aaPredicted RBP17.59■□□□□ 0.41
CPSF7-202ENST00000394888 ZNF174Q15697 407 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 TPTE2Q6XPS3 522 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 USP17L1Q7RTZ2 530 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 CRNKL1Q9BZJ0 848 aaKnown RBP17.59■□□□□ 0.41
CPSF7-202ENST00000394888 NFE2L3Q9Y4A8 694 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 SAFBQ15424 915 aaKnown RBP eCLIP17.59■□□□□ 0.41
CPSF7-202ENST00000394888 TCP11L1Q9NUJ3 509 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 FAM53CQ9NYF3 392 aa17.59■□□□□ 0.41
CPSF7-202ENST00000394888 ZNF215Q9UL58 517 aaPredicted RBP17.59■□□□□ 0.41
CPSF7-202ENST00000394888 VWA3AA6NCI4 1184 aa17.58■□□□□ 0.41
CPSF7-202ENST00000394888 RASA1P20936 1047 aa17.58■□□□□ 0.41
CPSF7-202ENST00000394888 RHBDL3P58872 404 aa17.58■□□□□ 0.41
CPSF7-202ENST00000394888 GRM4Q14833 912 aa17.58■□□□□ 0.41
CPSF7-202ENST00000394888 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.41
CPSF7-202ENST00000394888 IQCA1Q86XH1 822 aa17.58■□□□□ 0.41
CPSF7-202ENST00000394888 SMYD4Q8IYR2 804 aaPredicted RBP17.58■□□□□ 0.41
CPSF7-202ENST00000394888 MLKLQ8NB16 471 aa17.58■□□□□ 0.41
CPSF7-202ENST00000394888 RTCBQ9Y3I0 505 aaKnown RBP17.58■□□□□ 0.41
CPSF7-202ENST00000394888 SCN9AQ15858 1988 aa17.58■□□□□ 0.41
CPSF7-202ENST00000394888 TTC38Q5R3I4 469 aa17.58■□□□□ 0.4
CPSF7-202ENST00000394888 MYH7BA7E2Y1 1941 aa17.58■□□□□ 0.4
CPSF7-202ENST00000394888 TEX33O43247 280 aa17.58■□□□□ 0.4
CPSF7-202ENST00000394888 IL1R1P14778 569 aa17.58■□□□□ 0.4
CPSF7-202ENST00000394888 DHX58Q96C10 678 aa17.58■□□□□ 0.4
CPSF7-202ENST00000394888 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
CPSF7-202ENST00000394888 A0A0U1RQJ8 604 aa17.57■□□□□ 0.4
CPSF7-202ENST00000394888 PALM3A6NDB9 673 aaPredicted RBP17.57■□□□□ 0.4
CPSF7-202ENST00000394888 GYS1P13807 737 aa17.57■□□□□ 0.4
CPSF7-202ENST00000394888 ATP2B1P20020 1258 aa17.57■□□□□ 0.4
CPSF7-202ENST00000394888 PTPN14Q15678 1187 aa17.57■□□□□ 0.4
CPSF7-202ENST00000394888 ATRIPQ8WXE1 791 aa17.57■□□□□ 0.4
CPSF7-202ENST00000394888 GPKOWQ92917 476 aaPredicted RBP eCLIP17.57■□□□□ 0.43e-7■■■■□ 21.6
CPSF7-202ENST00000394888 ZPR1O75312 459 aa17.57■□□□□ 0.4
CPSF7-202ENST00000394888 FAM196AQ6ZSG2 479 aa17.57■□□□□ 0.4
CPSF7-202ENST00000394888 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 DGKHQ86XP1 1220 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 FERMT2Q96AC1 680 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 MCM9Q9NXL9 1143 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 FLT1P17948 1338 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 STXBP3O00186 592 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 TFAP4Q01664 338 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 SMARCE1Q969G3 411 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 KLRG2A4D1S0 409 aaPredicted RBP17.56■□□□□ 0.4
CPSF7-202ENST00000394888 RNF225M0QZC1 329 aaPredicted RBP17.56■□□□□ 0.4
CPSF7-202ENST00000394888 ERCC5P28715 1186 aaPredicted RBP17.56■□□□□ 0.4
CPSF7-202ENST00000394888 PIK3AP1Q6ZUJ8 805 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 RASGRP4Q8TDF6 673 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 TMEM60Q9H2L4 133 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 USP21Q9UK80 565 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 PCDHA6Q9UN73 950 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 LEMD3Q9Y2U8 911 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 PCDHA8Q9Y5H6 950 aa17.56■□□□□ 0.4
CPSF7-202ENST00000394888 FECHP22830 423 aa17.55■□□□□ 0.4
CPSF7-202ENST00000394888 SFPQP23246 707 aaKnown RBP eCLIP17.55■□□□□ 0.4
CPSF7-202ENST00000394888 DDR1Q08345 913 aa17.55■□□□□ 0.4
CPSF7-202ENST00000394888 MTERF4Q7Z6M4 381 aaKnown RBP17.55■□□□□ 0.4
CPSF7-202ENST00000394888 ADD3Q9UEY8 706 aaKnown RBP17.55■□□□□ 0.4
CPSF7-202ENST00000394888 POLLQ9UGP5 575 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms