RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 RCAN3Q9UKA8 241 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 PCDHB5Q9Y5E4 795 aa4.88□□□□□ -1.63
SMC6-202ENST00000381272 COL17A1Q9UMD9 1497 aaPredicted RBP4.87□□□□□ -1.63
SMC6-202ENST00000381272 LAMC1P11047 1609 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 GPRASP1Q5JY77 1395 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 ZBTB7CA1YPR0 619 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 ETF1P62495 437 aaKnown RBP4.87□□□□□ -1.63
SMC6-202ENST00000381272 TMF1P82094 1093 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 EFCAB2Q5VUJ9 269 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 UBE3DQ7Z6J8 389 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 KRTAP1-3Q8IUG1 177 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 STK11IPQ8N1F8 1099 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 FLCNQ8NFG4 579 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 NETO1Q8TDF5 533 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 WNT10AQ9GZT5 417 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 GTF2IRD1Q9UHL9 959 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 SLC5A6Q9Y289 635 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 TRAPPC8Q9Y2L5 1435 aa4.87□□□□□ -1.63
SMC6-202ENST00000381272 PLCH2O75038 1416 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 PLIN1O60240 522 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 ARMCX6Q7L4S7 300 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 PLD6Q8N2A8 252 aaKnown RBP4.86□□□□□ -1.63
SMC6-202ENST00000381272 AFAP1Q8N556 730 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 BCL2L13Q9BXK5 485 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 EIF2AK4Q9P2K8 1649 aaKnown RBP4.86□□□□□ -1.63
SMC6-202ENST00000381272 LRIG2O94898 1065 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 TFE3P19532 575 aaPredicted RBP4.86□□□□□ -1.63
SMC6-202ENST00000381272 CDK8P49336 464 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 TSNAXIP1Q2TAA8 658 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 MCTP1Q6DN14 999 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 ABI1Q8IZP0 508 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 AGBL5Q8NDL9 886 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 BCL7CQ8WUZ0 217 aaPredicted RBP4.86□□□□□ -1.63
SMC6-202ENST00000381272 BCL11AQ9H165 835 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 TLR6Q9Y2C9 796 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 TACC3Q9Y6A5 838 aa4.86□□□□□ -1.63
SMC6-202ENST00000381272 SPAG9O60271 1321 aaKnown RBP4.85□□□□□ -1.63
SMC6-202ENST00000381272 MAGI2Q86UL8 1455 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 IGF2BP3O00425 579 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMC6-202ENST00000381272 GFRA2O00451 464 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 CEACAM5P06731 702 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 CAP2P40123 477 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 OXCT1P55809 520 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 IFI16Q16666 785 aaKnown RBP4.85□□□□□ -1.63
SMC6-202ENST00000381272 NFXL1Q6ZNB6 911 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 HID1Q8IV36 788 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 PHC3Q8NDX5 983 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 HEXIM2Q96MH2 286 aaKnown RBP4.85□□□□□ -1.63
SMC6-202ENST00000381272 FOXQ1Q9C009 403 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 FBRSQ9HAH7 460 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 NOP58Q9Y2X3 529 aaKnown RBP4.85□□□□□ -1.63
SMC6-202ENST00000381272 ABCC1P33527 1531 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 MADDQ8WXG6 1647 aa4.85□□□□□ -1.63
SMC6-202ENST00000381272 RNF17Q9BXT8 1623 aaKnown RBP4.85□□□□□ -1.63
SMC6-202ENST00000381272 CEP152O94986 1710 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 ATP10AO60312 1499 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 TMEM265A0A087WTH1 108 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 PPP2R1AP30153 589 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 GRK4P32298 578 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 RPL6Q02878 288 aaKnown RBP4.84□□□□□ -1.63
SMC6-202ENST00000381272 SLBPQ14493 270 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMC6-202ENST00000381272 TMCO4Q5TGY1 634 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 CCDC84Q86UT8 332 aaPredicted RBP4.84□□□□□ -1.63
SMC6-202ENST00000381272 MFSD2AQ8NA29 543 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 GIPC2Q8TF65 315 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 JARID2Q92833 1246 aaPredicted RBP4.84□□□□□ -1.63
SMC6-202ENST00000381272 PAK6Q9NQU5 681 aaPredicted RBP4.84□□□□□ -1.63
SMC6-202ENST00000381272 ADGRE2Q9UHX3 823 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 VAV3Q9UKW4 847 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 U3KQE9 123 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 WASHC2CQ9Y4E1 1318 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 CLTCL1P53675 1640 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 IQGAP1P46940 1657 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 SPHKAPQ2M3C7 1700 aa4.84□□□□□ -1.63
SMC6-202ENST00000381272 BLMP54132 1417 aaPredicted RBP4.84□□□□□ -1.63
SMC6-202ENST00000381272 TAL1P17542 331 aaPredicted RBP4.83□□□□□ -1.64
SMC6-202ENST00000381272 ITIH2P19823 946 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 ANP32AP39687 249 aaKnown RBP4.83□□□□□ -1.64
SMC6-202ENST00000381272 PRKCQQ04759 706 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 PWP1Q13610 501 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 NKG7Q16617 165 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 FAM214BQ7L5A3 538 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 SKAP1Q86WV1 359 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 RELL1Q8IUW5 271 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 CRBNQ96SW2 442 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 PRDM5Q9NQX1 630 aaPredicted RBP4.83□□□□□ -1.64
SMC6-202ENST00000381272 KNSTRNQ9Y448 316 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 WDR7Q9Y4E6 1490 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 GNAT3A8MTJ3 354 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 KIF3BO15066 747 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 SLITRK5O94991 958 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 EOMESO95936 686 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 PDE4BQ07343 736 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 CAMK2GQ13555 558 aaPredicted RBP4.83□□□□□ -1.64
SMC6-202ENST00000381272 WDR43Q15061 677 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMC6-202ENST00000381272 C20orf194Q5TEA3 1177 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 SPRED2Q7Z698 418 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 HRASLS5Q96KN8 279 aa4.83□□□□□ -1.64
SMC6-202ENST00000381272 TMEM74Q96NL1 305 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms