RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 RAB23Q9ULC3 237 aa6.24□□□□□ -1.41
GEN1-202ENST00000381254 PARP4Q9UKK3 1724 aaKnown RBP6.24□□□□□ -1.41
GEN1-202ENST00000381254 C6orf163Q5TEZ5 329 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 NCAPG2Q86XI2 1143 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 TMEM199Q8N511 208 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 IQUBQ8NA54 791 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 RNPC3Q96LT9 517 aaKnown RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 TIGD1Q96MW7 591 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 MYO1AQ9UBC5 1043 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 BRPF3Q9ULD4 1205 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 GRM8O00222 908 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ZSCAN23Q3MJ62 389 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 CALR3Q96L12 384 aaKnown RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.23□□□□□ -1.41
GEN1-202ENST00000381254 TRIM75PA6NK02 468 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ADCY5O95622 1261 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 SDSP20132 328 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 HABP4Q5JVS0 413 aaKnown RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 ZNF713Q8N859 430 aaPredicted RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 SREK1Q8WXA9 508 aaKnown RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 ATP2A1O14983 1001 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 SYKP43405 635 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 CEP135Q66GS9 1140 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 CCDC84Q86UT8 332 aaPredicted RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 PIBF1Q8WXW3 757 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 FERMT2Q96AC1 680 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 MRFAP1L1Q96HT8 127 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 TMEM39AQ9NV64 488 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ZNF804BA4D1E1 1349 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ARHGAP6O43182 974 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 FBLN1P23142 703 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ATP5DP30049 168 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 RCAN1P53805 252 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 PTPROQ16827 1216 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 STRIP1Q5VSL9 837 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 CACNA2D4Q7Z3S7 1137 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 KIAA1524Q8TCG1 905 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 GOLGA1Q92805 767 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ZKSCAN4Q969J2 545 aaPredicted RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 USP40Q9NVE5 1235 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ZMYND8Q9ULU4 1186 aaPredicted RBP6.23□□□□□ -1.41
GEN1-202ENST00000381254 EXOC6BQ9Y2D4 811 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 USP16Q9Y5T5 823 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 ABCC4O15439 1325 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 BCL9O00512 1426 aa6.23□□□□□ -1.41
GEN1-202ENST00000381254 RARBP10826 455 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
GEN1-202ENST00000381254 GJB2P29033 226 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 MSANTD4Q8NCY6 345 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 SLC28A3Q9HAS3 691 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 STAP2Q9UGK3 403 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 UNCXA6NJT0 531 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 ZBTB43O43298 467 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 SCNN1DP51172 638 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 CEP85Q6P2H3 762 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 MFSD6Q6ZSS7 791 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 OPTNQ96CV9 577 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 USP26Q9BXU7 913 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 ZNF541Q9H0D2 1346 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 MIS18AQ9NYP9 233 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 CEP83Q9Y592 693 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 A0A1W2PQ27 194 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 A0A1W2PQ64 194 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 A0A1W2PQD8 194 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 STAMBPO95630 424 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 XRCC6P12956 609 aaKnown RBP eCLIP6.22□□□□□ -1.41
GEN1-202ENST00000381254 ABCD1P33897 745 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 MYL5Q02045 173 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 TMTC1Q8IUR5 882 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 TEX2Q8IWB9 1127 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 MAIP1Q8WWC4 291 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 MKNK2Q9HBH9 465 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 hCG_1984214I3L0E3 225 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 METAP2P50579 478 aaKnown RBP eCLIP6.22□□□□□ -1.41
GEN1-202ENST00000381254 TNNC1P63316 161 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 DDR1Q08345 913 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 CCDC184Q52MB2 194 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 GOPCQ9HD26 462 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 RNF14Q9UBS8 474 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 ZBTB7BO15156 539 aaPredicted RBP6.22□□□□□ -1.41
GEN1-202ENST00000381254 SPTLC2O15270 562 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 RNF113AO15541 343 aaKnown RBP6.22□□□□□ -1.41
GEN1-202ENST00000381254 CUTAO60888 179 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 TCP10Q12799 353 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 B4GALNT4Q76KP1 1039 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 POTEDQ86YR6 584 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 ZNF444Q8N0Y2 327 aaPredicted RBP6.22□□□□□ -1.41
GEN1-202ENST00000381254 MICAL1Q8TDZ2 1067 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 NUP133Q8WUM0 1156 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 WNK4Q96J92 1243 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 DEFB118Q96PH6 123 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 DSCC1Q9BVC3 393 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 CSRNP2Q9H175 543 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 LGR6Q9HBX8 967 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 CAMTA1Q9Y6Y1 1673 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 ABCC6O95255 1503 aa6.22□□□□□ -1.41
GEN1-202ENST00000381254 NCAPD2Q15021 1401 aa6.21□□□□□ -1.41
GEN1-202ENST00000381254 IFIT3O14879 490 aaKnown RBP6.21□□□□□ -1.41
GEN1-202ENST00000381254 PTF1AQ7RTS3 328 aa6.21□□□□□ -1.41
GEN1-202ENST00000381254 APBB1IPQ7Z5R6 666 aaPredicted RBP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms