RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 C12orf42Q96LP6 360 aa25.97■■□□□ 1.75
GFRA3-202ENST00000378362 NUP88Q99567 741 aaPredicted RBP25.97■■□□□ 1.75
GFRA3-202ENST00000378362 TXNRD2Q9NNW7 524 aa25.97■■□□□ 1.75
GFRA3-202ENST00000378362 MTMR4Q9NYA4 1195 aa25.97■■□□□ 1.75
GFRA3-202ENST00000378362 PNMA3Q9UL41 463 aa25.97■■□□□ 1.75
GFRA3-202ENST00000378362 TAF6LQ9Y6J9 622 aa25.97■■□□□ 1.75
GFRA3-202ENST00000378362 PABPC4Q13310 644 aaKnown RBP eCLIP25.96■■□□□ 1.75
GFRA3-202ENST00000378362 AKNAD1Q5T1N1 836 aa25.96■■□□□ 1.75
GFRA3-202ENST00000378362 MFSD6Q6ZSS7 791 aa25.96■■□□□ 1.75
GFRA3-202ENST00000378362 OTOP1Q7RTM1 612 aa25.96■■□□□ 1.75
GFRA3-202ENST00000378362 TANGO6Q9C0B7 1094 aa25.96■■□□□ 1.75
GFRA3-202ENST00000378362 VCPKMTQ9H867 229 aa25.96■■□□□ 1.75
GFRA3-202ENST00000378362 RAD50Q92878 1312 aa25.96■■□□□ 1.75
GFRA3-202ENST00000378362 HERVK_113P62684 666 aa25.95■■□□□ 1.75
GFRA3-202ENST00000378362 CATSPERGQ6ZRH7 1159 aa25.95■■□□□ 1.75
GFRA3-202ENST00000378362 ERO1AQ96HE7 468 aa25.95■■□□□ 1.75
GFRA3-202ENST00000378362 PAGR1Q9BTK6 254 aa25.95■■□□□ 1.75
GFRA3-202ENST00000378362 MTMR7Q9Y216 660 aa25.95■■□□□ 1.75
GFRA3-202ENST00000378362 USP17L15C9J2P7 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L13C9JLJ4 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L11C9JVI0 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L18D6R9N7 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L22D6RA61 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L17D6RBQ6 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L19D6RCP7 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L20D6RJB6 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 FGRP09769 529 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 USP17L24Q0WX57 530 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 ZKSCAN3Q9BRR0 538 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 ESYT1Q9BSJ8 1104 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 EFCC1Q9HA90 598 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 STX8Q9UNK0 236 aa25.95■■□□□ 1.74
GFRA3-202ENST00000378362 ORC4O43929 436 aa25.94■■□□□ 1.74
GFRA3-202ENST00000378362 PSMC4P43686 418 aa25.94■■□□□ 1.74
GFRA3-202ENST00000378362 RASGRP2Q7LDG7 609 aa25.94■■□□□ 1.74
GFRA3-202ENST00000378362 TRIM47Q96LD4 638 aa25.94■■□□□ 1.74
GFRA3-202ENST00000378362 MKI67P46013 3256 aaKnown RBP25.93■■□□□ 1.74
GFRA3-202ENST00000378362 CAPN15O75808 1086 aa25.93■■□□□ 1.74
GFRA3-202ENST00000378362 IMMTQ16891 758 aaKnown RBP25.93■■□□□ 1.74
GFRA3-202ENST00000378362 STAG1Q8WVM7 1258 aa25.93■■□□□ 1.74
GFRA3-202ENST00000378362 FBXO28Q9NVF7 368 aa25.93■■□□□ 1.74
GFRA3-202ENST00000378362 NYAP2Q9P242 653 aa25.93■■□□□ 1.74
GFRA3-202ENST00000378362 Q3C1V9 767 aa25.93■■□□□ 1.74
GFRA3-202ENST00000378362 FAM83BQ5T0W9 1011 aa25.93■■□□□ 1.74
GFRA3-202ENST00000378362 RBPJLQ9UBG7 517 aa25.93■■□□□ 1.74
GFRA3-202ENST00000378362 FMNL1O95466 1100 aaPredicted RBP25.92■■□□□ 1.74
GFRA3-202ENST00000378362 TTLL1O95922 423 aa25.92■■□□□ 1.74
GFRA3-202ENST00000378362 SH2D4AQ9H788 454 aa25.92■■□□□ 1.74
GFRA3-202ENST00000378362 B4E1Z4 1266 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 F5H6K3 240 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 KLRC3Q07444 240 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 CTNNA3Q9UI47 895 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 NDUFB10O96000 172 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 CYP21A2P08686 494 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 KIF22Q14807 665 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 GOPCQ9HD26 462 aa25.91■■□□□ 1.74
GFRA3-202ENST00000378362 LAMA4Q16363 1823 aa25.9■■□□□ 1.74
GFRA3-202ENST00000378362 PLIN4Q96Q06 1357 aa25.9■■□□□ 1.74
GFRA3-202ENST00000378362 SPDYE16A6NNV3 312 aaPredicted RBP25.9■■□□□ 1.74
GFRA3-202ENST00000378362 KDM4AO75164 1064 aa25.9■■□□□ 1.74
GFRA3-202ENST00000378362 FLOT1O75955 427 aa25.9■■□□□ 1.74
GFRA3-202ENST00000378362 LSG1Q9H089 658 aaKnown RBP25.9■■□□□ 1.74
GFRA3-202ENST00000378362 ANO2Q9NQ90 1003 aa25.9■■□□□ 1.74
GFRA3-202ENST00000378362 RBM8AQ9Y5S9 174 aaKnown RBP25.9■■□□□ 1.74
GFRA3-202ENST00000378362 KIAA1211Q6ZU35 1233 aa25.89■■□□□ 1.74
GFRA3-202ENST00000378362 MAP4K1Q92918 833 aa25.89■■□□□ 1.74
GFRA3-202ENST00000378362 ABHD8Q96I13 439 aa25.89■■□□□ 1.74
GFRA3-202ENST00000378362 RLFQ13129 1914 aa25.89■■□□□ 1.73
GFRA3-202ENST00000378362 CDC45O75419 566 aa25.88■■□□□ 1.73
GFRA3-202ENST00000378362 GCLCP48506 637 aaPredicted RBP25.88■■□□□ 1.73
GFRA3-202ENST00000378362 FAM110CQ1W6H9 321 aa25.88■■□□□ 1.73
GFRA3-202ENST00000378362 LPAR1Q92633 364 aa25.88■■□□□ 1.73
GFRA3-202ENST00000378362 BTBD7Q9P203 1132 aa25.88■■□□□ 1.73
GFRA3-202ENST00000378362 ISY1Q9ULR0 285 aaKnown RBP25.88■■□□□ 1.73
GFRA3-202ENST00000378362 CNMDO75829 334 aa25.88■■□□□ 1.73
GFRA3-202ENST00000378362 MKL1Q969V6 931 aa25.88■■□□□ 1.73
GFRA3-202ENST00000378362 ATG4CQ96DT6 458 aa25.88■■□□□ 1.73
GFRA3-202ENST00000378362 RNF41Q9H4P4 317 aaPredicted RBP25.88■■□□□ 1.73
GFRA3-202ENST00000378362 MGAMO43451 1857 aa25.87■■□□□ 1.73
GFRA3-202ENST00000378362 COG2Q14746 738 aa25.87■■□□□ 1.73
GFRA3-202ENST00000378362 PORCNQ9H237 461 aa25.87■■□□□ 1.73
GFRA3-202ENST00000378362 ZSWIM5Q9P217 1185 aa25.87■■□□□ 1.73
GFRA3-202ENST00000378362 GABRQQ9UN88 632 aa25.87■■□□□ 1.73
GFRA3-202ENST00000378362 U3KPZ7 1027 aaPredicted RBP25.87■■□□□ 1.73
GFRA3-202ENST00000378362 WDR46O15213 610 aaKnown RBP25.86■■□□□ 1.73
GFRA3-202ENST00000378362 MCCP23508 829 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 ESR2Q92731 530 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 PTPN22Q9Y2R2 807 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 PTCH2Q9Y6C5 1203 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 KIAA0100Q14667 2235 aaKnown RBP25.86■■□□□ 1.73
GFRA3-202ENST00000378362 ERVK-9P63128 1117 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 ERVK-24P63145 666 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 COL9A3Q14050 684 aaPredicted RBP25.86■■□□□ 1.73
GFRA3-202ENST00000378362 SLFN13Q68D06 897 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 STOX1Q6ZVD7 989 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 GPRC5AQ8NFJ5 357 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 HPS5Q9UPZ3 1129 aa25.86■■□□□ 1.73
GFRA3-202ENST00000378362 MYCP01106 439 aaPredicted RBP25.85■■□□□ 1.73
GFRA3-202ENST00000378362 PRKCZQ05513 592 aa25.85■■□□□ 1.73
GFRA3-202ENST00000378362 CHST3Q7LGC8 479 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms