RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 CCNI2Q6ZMN8 369 aaPredicted RBP10.88□□□□□ -0.67
LRRC40-201ENST00000370952 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
LRRC40-201ENST00000370952 JAKMIP2Q96AA8 810 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 FAM107BQ9H098 131 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 ITIH6Q6UXX5 1313 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 MST1RQ04912 1400 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 PSMD14O00487 310 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 CHRM1P11229 460 aaPredicted RBP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 UBXN1Q04323 297 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 PPARAQ07869 468 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 CT47A1Q5JQC4 288 aaPredicted RBP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 NBPF14Q5TI25 921 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 ANKRD20A12PQ8NF67 263 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 AIDAQ96BJ3 306 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 VPS54Q9P1Q0 977 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 CAPN7Q9Y6W3 813 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 GRIN2DO15399 1336 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 LAMB4A4D0S4 1761 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 hCG_1642624A0A1W2PR95 340 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 TTC26A0AVF1 554 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 SHTN1A0MZ66 631 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 MYO1FO00160 1098 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 WNT7AO00755 349 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 MCM3P25205 808 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 MAP2K2P36507 400 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 PPFIA1Q13136 1202 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 EARS2Q5JPH6 523 aaKnown RBP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 RGPD5Q99666 1765 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 RCCD1A6NED2 376 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 KCNJ18B7U540 433 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 EIF3HO15372 352 aaKnown RBP eCLIP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 IFNAR1P17181 557 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 MCAMP43121 646 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 KCNJ12Q14500 433 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 NBPF10Q6P3W6 841 aaKnown RBP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 EP400NLQ6ZTU2 488 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 KIAA1328Q86T90 577 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 TICAM2Q86XR7 235 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 NBPF15Q8N660 670 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 NUP133Q8WUM0 1156 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 RAPGEF4Q8WZA2 1011 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 LACRTQ9GZZ8 138 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 LIMA1Q9UHB6 759 aaKnown RBP10.87□□□□□ -0.67
LRRC40-201ENST00000370952 TACC3Q9Y6A5 838 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 DUSP10Q9Y6W6 482 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 MYH6P13533 1939 aa10.87□□□□□ -0.67
LRRC40-201ENST00000370952 MATR3P43243 847 aaKnown RBP eCLIP10.86□□□□□ -0.67
LRRC40-201ENST00000370952 PSEN1P49768 467 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 GSCP56915 257 aaPredicted RBP10.86□□□□□ -0.67
LRRC40-201ENST00000370952 PDCLQ13371 301 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 TTF1Q15361 905 aaPredicted RBP10.86□□□□□ -0.67
LRRC40-201ENST00000370952 RTN1Q16799 776 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 CCDC57Q2TAC2 916 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 SH3RF1Q7Z6J0 888 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 ARL8AQ96BM9 186 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
LRRC40-201ENST00000370952 HAUS4Q9H6D7 363 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 JADE2Q9NQC1 790 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 NLRP2Q9NX02 1062 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 STK36Q9NRP7 1315 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 MACROD2A1Z1Q3 448 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 TARSL2A2RTX5 802 aaKnown RBP10.86□□□□□ -0.67
LRRC40-201ENST00000370952 SEMA3EO15041 775 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 PHKG2P15735 406 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 ADD2P35612 726 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 PAPD7Q5XG87 772 aaKnown RBP10.86□□□□□ -0.67
LRRC40-201ENST00000370952 SGMS1Q86VZ5 419 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 WASF1Q92558 559 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 DMGDHQ9UI17 866 aaKnown RBP10.86□□□□□ -0.67
LRRC40-201ENST00000370952 SCN11AQ9UI33 1791 aa10.86□□□□□ -0.67
LRRC40-201ENST00000370952 ZNF532Q9HCE3 1301 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 H0YHG0 523 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 CIAO1O76071 339 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 IDEP14735 1019 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 ATP1A2P50993 1020 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 ZC3H6P61129 1189 aaKnown RBP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 CKAP4Q07065 602 aaKnown RBP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 TCP11X2Q5H9J9 407 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 GSDMAQ96QA5 445 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 PIH1D3Q9NQM4 214 aaKnown RBP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 AATFQ9NY61 560 aaKnown RBP eCLIP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 CEP131Q9UPN4 1083 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 XDHP47989 1333 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 TRIM49BA6NDI0 452 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 TRIM75PA6NK02 468 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 PRDM1O75626 825 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 CYP27A1Q02318 531 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 ZNF174Q15697 407 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 KCTD16Q68DU8 428 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms