RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 FGD4Q96M96 766 aa6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 CDC6Q99741 560 aa6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 FAM126AQ9BYI3 521 aaPredicted RBP6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 FOXQ1Q9C009 403 aa6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 PIDD1Q9HB75 910 aa6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 FAM105AQ9NUU6 356 aa6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 TYW1Q9NV66 732 aaKnown RBP6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 LRP2BPQ9P2M1 347 aa6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 ACTL7BQ9Y614 415 aa6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 COL17A1Q9UMD9 1497 aaPredicted RBP6.41□□□□□ -1.38
RNU6-1339P-201ENST00000363574 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 SHOXO15266 292 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 KCNQ2O43526 872 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 LRIG2O94898 1065 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 STAT3P40763 770 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 GRIA2P42262 883 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 ASPAP45381 313 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 FNDC3BQ53EP0 1204 aaKnown RBP6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 ANKRD39Q53RE8 183 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 NBPF12Q5TAG4 269 aaPredicted RBP6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 ARMCX6Q7L4S7 300 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 JAMLQ86YT9 394 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 SMYD4Q8IYR2 804 aaPredicted RBP6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 C12orf50Q8NA57 414 aaPredicted RBP6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 WHAMMQ8TF30 809 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 ZNF451Q9Y4E5 1061 aa6.4□□□□□ -1.38
RNU6-1339P-201ENST00000363574 TBX1O43435 398 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PDE8AO60658 829 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PDGFRBP09619 1106 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 FGFR1P11362 822 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 CNGA1P29973 690 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 CDKN1CP49918 316 aaPredicted RBP6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 SCUBE1Q8IWY4 988 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 MFSD2AQ8NA29 543 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 DNAJB8Q8NHS0 232 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 VWCEQ96DN2 955 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 MRPL4Q9BYD3 311 aaKnown RBP6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 MKRN2Q9H000 416 aaKnown RBP6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 GBP3Q9H0R5 595 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 MRPL18Q9H0U6 180 aaKnown RBP6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 RRAGCQ9HB90 399 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 SSU72Q9NP77 194 aaKnown RBP6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PCOLCE2Q9UKZ9 415 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 CEP131Q9UPN4 1083 aa6.39□□□□□ -1.39
RNU6-1339P-201ENST00000363574 KRBA1A5PL33 1030 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PRODHO43272 600 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PARNO95453 639 aaKnown RBP6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PABPC1P11940 636 aaKnown RBP6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 CD247P20963 164 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 ANKRD34AQ69YU3 496 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 ZNF787Q6DD87 383 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 FDX2Q6P4F2 183 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 LINC00114Q6XXX2 140 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 ADAT2Q7Z6V5 191 aaKnown RBP6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 RNF180Q86T96 592 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 C7orf61Q8IZ16 206 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 AGGF1Q8N302 714 aaeCLIP6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PRPF38AQ8NAV1 312 aaKnown RBP6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 BVESQ8NE79 360 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 OSBP2Q969R2 916 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 MRGPRX3Q96LB0 322 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 IPO9Q96P70 1041 aaKnown RBP6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PLVAPQ9BX97 442 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 CAAP1Q9H8G2 361 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 WHRNQ9P202 907 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
RNU6-1339P-201ENST00000363574 GSG1L2A8MUP6 293 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PPM1BO75688 479 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 EVA1CP58658 441 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 AUHQ13825 339 aaKnown RBP6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 NSMFQ6X4W1 530 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 NOL8Q76FK4 1167 aaKnown RBP6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 KREMEN1Q96MU8 473 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 ACSS3Q9H6R3 686 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 GP6Q9HCN6 339 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 SUGT1Q9Y2Z0 365 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 EMC9Q9Y3B6 208 aa6.37□□□□□ -1.39
RNU6-1339P-201ENST00000363574 DNAJC25-GNG10A0A024R161 153 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 S100BP04271 92 aaPredicted RBP6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 ELNP15502 786 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 SDSP20132 328 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 SOX5P35711 763 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 GMPRP36959 345 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 PREPP48147 710 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 SNRPNP63162 240 aaKnown RBP6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 RNF4P78317 190 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 ZNF385CQ66K41 422 aaPredicted RBP6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 LETMD1Q6P1Q0 360 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 FERMT3Q86UX7 667 aa6.36□□□□□ -1.39
RNU6-1339P-201ENST00000363574 DDX42Q86XP3 938 aaKnown RBP eCLIP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms