RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 ZNF654Q8IZM8 581 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 KIAA1683Q9H0B3 1180 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 TPCN1Q9ULQ1 816 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 SYNPO2Q9UMS6 1093 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 LIMCH1Q9UPQ0 1083 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 MCM2P49736 904 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 APLP1P51693 650 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 TROAPQ12815 778 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 MTMR2Q13614 643 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 ZYXQ15942 572 aaKnown RBP16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 MYL10Q9BUA6 226 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 MTMR7Q9Y216 660 aa16.05■□□□□ 0.16
TUBA1B-202ENST00000336023 TRPM7Q96QT4 1865 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 DOCK1Q14185 1865 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 F5H6K3 240 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 ZBTB43O43298 467 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 RAD21O60216 631 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 GJA5P36382 358 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 ZNF157P51786 506 aaPredicted RBP16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 KLRC3Q07444 240 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 MICU3Q86XE3 530 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 NUP133Q8WUM0 1156 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 SNX21Q969T3 373 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 CHMP4CQ96CF2 233 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 VCPKMTQ9H867 229 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
TUBA1B-202ENST00000336023 OTOFQ9HC10 1997 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 GOLGA8BA8MQT2 603 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 C19orf81C9J6K1 198 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 CXCL11O14625 94 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 DDAH1O94760 285 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 NDUFB10O96000 172 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 RXRAP19793 462 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 USP14P54578 494 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 KIAA1755Q5JYT7 1200 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 SLFN13Q68D06 897 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 RGMBQ6NW40 437 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 HPS5Q9UPZ3 1129 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 KCNH4Q9UQ05 1017 aa16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
TUBA1B-202ENST00000336023 PDHBP11177 359 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 HMGCS2P54868 508 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 DGKZQ13574 1117 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 ME3Q16798 604 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 SPRYD7Q5W111 196 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 RASGRP2Q7LDG7 609 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 CREBZFQ9NS37 354 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.16
TUBA1B-202ENST00000336023 ATAD5Q96QE3 1844 aa16.02■□□□□ 0.15
TUBA1B-202ENST00000336023 LARGE1O95461 756 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 CALM1P0DP23 149 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 CALM2P0DP24 149 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 CALM3P0DP25 149 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 SNHG28P0DPA3 235 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 RCAN1P53805 252 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 MKRN3Q13064 507 aaKnown RBP16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 STK3Q13188 491 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 RASAL3Q86YV0 1011 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 CCDC144CPQ8IYA2 1237 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 HHIPL1Q96JK4 782 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 A0A0G2JLL6 359 aaPredicted RBP16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 GOLGA8AA7E2F4 631 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 ZBTB48P10074 688 aaPredicted RBP16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 SLC1A4P43007 532 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 METAP2P50579 478 aaKnown RBP eCLIP16.01■□□□□ 0.152e-11■■■■□ 22.7
TUBA1B-202ENST00000336023 CCT2P78371 535 aaKnown RBP16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 SNAPC2Q13487 334 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 SH3D19Q5HYK7 790 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 PRRT2Q7Z6L0 340 aaPredicted RBP16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 FANCBQ8NB91 859 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 DCAF4Q8WV16 495 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 LPAR1Q92633 364 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 GMCL1Q96IK5 515 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 TMX3Q96JJ7 454 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 SLKQ9H2G2 1235 aaPredicted RBP16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 TMOD4Q9NZQ9 345 aa16.01■□□□□ 0.15
TUBA1B-202ENST00000336023 PFKFB2O60825 505 aa16■□□□□ 0.15
TUBA1B-202ENST00000336023 PARP1P09874 1014 aaKnown RBP16■□□□□ 0.15
TUBA1B-202ENST00000336023 GRM4Q14833 912 aa16■□□□□ 0.15
TUBA1B-202ENST00000336023 RTN1Q16799 776 aa16■□□□□ 0.15
TUBA1B-202ENST00000336023 HSCBQ8IWL3 235 aa16■□□□□ 0.15
TUBA1B-202ENST00000336023 NECAB1Q8N987 351 aa16■□□□□ 0.15
TUBA1B-202ENST00000336023 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
TUBA1B-202ENST00000336023 CCDC102AQ96A19 550 aa16■□□□□ 0.15
TUBA1B-202ENST00000336023 C12orf42Q96LP6 360 aa16■□□□□ 0.15
TUBA1B-202ENST00000336023 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
TUBA1B-202ENST00000336023 SH2B1Q9NRF2 756 aaPredicted RBP16■□□□□ 0.15
TUBA1B-202ENST00000336023 SLC10A3P09131 477 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms