RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CWC15Q9P013 229 aaKnown RBP18.68■□□□□ 0.58
CDC42EP4-201ENST00000335793 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 USP17L21D6R901 530 aa18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 NOM1Q5C9Z4 860 aaKnown RBP18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 TTC38Q5R3I4 469 aa18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 SRLQ86TD4 932 aa18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 COL5A2P05997 1499 aaPredicted RBP18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 ENAHQ8N8S7 591 aaPredicted RBP18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 PLIN2Q99541 437 aa18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 RNF26Q9BY78 433 aaPredicted RBP18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 BCCIPQ9P287 314 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 KCPQ6ZWJ8 1503 aa18.67■□□□□ 0.58
CDC42EP4-201ENST00000335793 IBSPP21815 317 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 SOS2Q07890 1332 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 ADGRA1Q86SQ6 560 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 TMEM139Q8IV31 216 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 PARD6BQ9BYG5 372 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 RTL9Q8NET4 1388 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 NUTM2BA6NNL0 878 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 NUTM2EB1AL46 878 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 ERCC5P28715 1186 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 FOXR1Q6PIV2 292 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 A0A087X0B3 334 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 RHOXF2BP0C7M4 288 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 CD44P16070 742 aaKnown RBP18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 ZNF18P17022 549 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 NR1I3Q14994 352 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 GPR161Q8N6U8 529 aaKnown RBP18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 RHOXF2Q9BQY4 288 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 TAB2Q9NYJ8 693 aa18.66■□□□□ 0.58
CDC42EP4-201ENST00000335793 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 ZNF579Q8NAF0 562 aaKnown RBP18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 EEF2KMTQ96G04 330 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 CTAGE1Q96RT6 745 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 A0A0U1RQJ8 604 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 TSPY2A6NKD2 308 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 NMT2O60551 498 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 CHMP4BP1P59074 171 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 TSR1Q2NL82 804 aaKnown RBP18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 ZNF34Q8IZ26 560 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 IQUBQ8NA54 791 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 ATRIPQ8WXE1 791 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 CDC5LQ99459 802 aaKnown RBP18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 NWD2Q9ULI1 1742 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
CDC42EP4-201ENST00000335793 MAP3K9P80192 1104 aa18.64■□□□□ 0.58
CDC42EP4-201ENST00000335793 CTR9Q6PD62 1173 aa18.64■□□□□ 0.58
CDC42EP4-201ENST00000335793 ANKRD18AQ8IVF6 992 aa18.64■□□□□ 0.58
CDC42EP4-201ENST00000335793 PCMTD1Q96MG8 357 aaPredicted RBP18.64■□□□□ 0.58
CDC42EP4-201ENST00000335793 MED15Q96RN5 788 aa18.64■□□□□ 0.58
CDC42EP4-201ENST00000335793 SARSP49591 514 aaKnown RBP18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 TBX2Q13207 712 aaPredicted RBP18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 SMC1AQ14683 1233 aaKnown RBP18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 RAD9BQ6WBX8 426 aa18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 ACRBPQ8NEB7 543 aa18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 AATFQ9NY61 560 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 JAKMIP3Q5VZ66 844 aa18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 CXorf56Q9H5V9 222 aa18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 MRFAP1Q9Y605 127 aa18.64■□□□□ 0.57
CDC42EP4-201ENST00000335793 MYH15Q9Y2K3 1946 aa18.63■□□□□ 0.57
CDC42EP4-201ENST00000335793 TXLNAP40222 546 aa18.63■□□□□ 0.57
CDC42EP4-201ENST00000335793 CCDC87Q9NVE4 849 aa18.63■□□□□ 0.57
CDC42EP4-201ENST00000335793 CCDC24Q8N4L8 307 aa18.63■□□□□ 0.57
CDC42EP4-201ENST00000335793 FERMT2Q96AC1 680 aa18.63■□□□□ 0.57
CDC42EP4-201ENST00000335793 FAM53CQ9NYF3 392 aa18.63■□□□□ 0.57
CDC42EP4-201ENST00000335793 SUFUQ9UMX1 484 aa18.63■□□□□ 0.57
CDC42EP4-201ENST00000335793 A0A1B0GTH6 734 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 WNT7AO00755 349 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 CC2D1AQ6P1N0 951 aaPredicted RBP18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 SLF1Q9BQI6 1058 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 CTAGE9A4FU28 777 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 CNGA4Q8IV77 575 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 ADGRG1Q9Y653 693 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 SPEF2Q9C093 1822 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 KRT9P35527 623 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 UBXN1Q04323 297 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 GSDMAQ96QA5 445 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 GUCA1BQ9UMX6 200 aa18.62■□□□□ 0.57
CDC42EP4-201ENST00000335793 BMP15O95972 392 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 NT5DC1Q5TFE4 455 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 SLC35F6Q8N357 371 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 STRCP1A6NGW2 1772 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 TFRCP02786 760 aaKnown RBP18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 STAT6P42226 847 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 CUL4BQ13620 913 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 FAM43BQ6ZT52 329 aaPredicted RBP18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 RASGRP4Q8TDF6 673 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 RABGGTAQ92696 567 aa18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 RBM28Q9NW13 759 aaKnown RBP18.61■□□□□ 0.57
CDC42EP4-201ENST00000335793 COL18A1P39060 1754 aa18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 PRPF3O43395 683 aaKnown RBP18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 PKN1Q16512 942 aa18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 PANX2Q96RD6 677 aa18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 ADD3Q9UEY8 706 aaKnown RBP18.6■□□□□ 0.57
CDC42EP4-201ENST00000335793 TNS2Q63HR2 1409 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms