RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 SEPT14Q6ZU15 432 aa18.3■□□□□ 0.52
ARHGEF40-201ENST00000298694 DEPTORQ8TB45 409 aa18.3■□□□□ 0.52
ARHGEF40-201ENST00000298694 RIOK1Q9BRS2 568 aaKnown RBP18.3■□□□□ 0.52
ARHGEF40-201ENST00000298694 TSKSQ9UJT2 592 aa18.3■□□□□ 0.52
ARHGEF40-201ENST00000298694 PAK2Q13177 524 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 RUFY4Q6ZNE9 571 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 PCDHB13Q9Y5F0 798 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 FRMPD2Q68DX3 1309 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 I3L4J1 428 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 KRT15P19012 456 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 LGSNQ5TDP6 509 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 CACNA2D3Q8IZS8 1091 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 CMTR1Q8N1G2 835 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 SMCR8Q8TEV9 937 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 SORBS3O60504 671 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 TBC1D8O95759 1140 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 P4HA1P13674 534 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 CYP2J2P51589 502 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 CTSWP56202 376 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 CCDC62Q6P9F0 684 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 MCUR1Q96AQ8 359 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 ARHGEF2Q92974 986 aaKnown RBP18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 VPS37BQ9H9H4 285 aa18.29■□□□□ 0.52
ARHGEF40-201ENST00000298694 MAN1A1P33908 653 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 SRGAP1Q7Z6B7 1085 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 GPBP1Q86WP2 473 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 TESPA1A2RU30 521 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 ARHGEF16Q5VV41 709 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 METTL13Q8N6R0 699 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 IFIH1Q9BYX4 1025 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 LONRF2Q1L5Z9 754 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 BSPRYQ5W0U4 402 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 CCDC84Q86UT8 332 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 ZNF654Q8IZM8 581 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 U2AF1L4Q8WU68 220 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 NAA25Q14CX7 972 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 EAPPQ56P03 285 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 GSDMBQ8TAX9 411 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 ANO3Q9BYT9 981 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 HAUS2Q9NVX0 235 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 CROCCP2Q86T23 111 aa18.28■□□□□ 0.52
ARHGEF40-201ENST00000298694 GNA14O95837 355 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 GBP1P32455 592 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 YWHAEP62258 255 aaKnown RBP18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 MFSD14BQ5SR56 506 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 VSIG1Q86XK7 387 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 PAGR1Q9BTK6 254 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 ZSCAN10Q96SZ4 725 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 ATP5JP18859 108 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 YARSP54577 528 aaKnown RBP18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 TEKT1Q969V4 418 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 ST7Q9NRC1 585 aa18.27■□□□□ 0.52
ARHGEF40-201ENST00000298694 LPXNO60711 386 aa18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 PCK1P35558 622 aa18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 MED10Q9BTT4 135 aa18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 NUCKS1Q9H1E3 243 aaKnown RBP18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 PLCB1Q9NQ66 1216 aa18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 ATP8A2Q9NTI2 1148 aa18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 KMT5BQ4FZB7 885 aa18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 MLXIPQ9HAP2 919 aa18.27■□□□□ 0.51
ARHGEF40-201ENST00000298694 APBA3O96018 575 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 SF3A3Q12874 501 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■□□ 16.2
ARHGEF40-201ENST00000298694 CHURC1Q8WUH1 139 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 MAIP1Q8WWC4 291 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 TECP42680 631 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 BIRC2Q13490 618 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 MTMR3Q13615 1198 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 CUL4BQ13620 913 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 SEPT6Q14141 434 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 HACE1Q8IYU2 909 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 AS3MTQ9HBK9 375 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 USP17L12C9JPN9 530 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 USP17L21D6R901 530 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 ADKP55263 362 aaKnown RBP18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 PRR16Q569H4 304 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 SND1Q7KZF4 910 aaKnown RBP eCLIP18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 VCX3BQ9H321 246 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 TRPC6Q9Y210 931 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 UHRF1BP1Q6BDS2 1440 aa18.26■□□□□ 0.51
ARHGEF40-201ENST00000298694 SLC12A2P55011 1212 aa18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 ME3Q16798 604 aa18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 RPS8P62241 208 aaKnown RBP18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 GNPTABQ3T906 1256 aa18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 DENND2CQ68D51 928 aa18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 AMFRQ9UKV5 643 aa18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 XRCC5P13010 732 aaKnown RBP18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 ABCB4P21439 1286 aa18.25■□□□□ 0.51
ARHGEF40-201ENST00000298694 RSAD2Q8WXG1 361 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms