RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MYCT1Q8N699 235 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 TTC16Q8NEE8 873 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 BLZF1Q9H2G9 400 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 PCDHA1Q9Y5I3 950 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 GCOM1H8Y6P7 765 aaPredicted RBP15.36■□□□□ 0.05
NPC1-201ENST00000269228 POLR2MP0CAP2 368 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 KRT83P78385 493 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 ARHGEF16Q5VV41 709 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 PI4K2BQ8TCG2 481 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 BEGAINQ9BUH8 593 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 CETN3O15182 167 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 STRN3Q13033 797 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 POSTNQ15063 836 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 SLC27A3Q5K4L6 730 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 PLVAPQ9BX97 442 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 MTMR6Q9Y217 621 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 TACC1O75410 805 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 VPS72Q15906 364 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 DYNLL2Q96FJ2 89 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 ISCA1Q9BUE6 129 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 PRDM10Q9NQV6 1147 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 ERCC3P19447 782 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 ACTN2P35609 894 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 PAK1Q13153 545 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 CIAPIN1Q6FI81 312 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 ANKRD35Q8N283 1001 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 PIM2Q9P1W9 311 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 SERTAD1Q9UHV2 236 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 EN1Q05925 392 aaPredicted RBP15.35■□□□□ 0.05
NPC1-201ENST00000269228 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 GLG1Q92896 1179 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 SYNRGQ9UMZ2 1314 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 CARMIL3Q8ND23 1372 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.058e-6■■□□□ 11.9
NPC1-201ENST00000269228 MLKLQ8NB16 471 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 NRKQ7Z2Y5 1582 aa15.35■□□□□ 0.05
NPC1-201ENST00000269228 TECP42680 631 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 MIER3Q7Z3K6 550 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 CCPG1Q9ULG6 757 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 KRT86O43790 486 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 TTLL1O95922 423 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 EEF2P13639 858 aaKnown RBP15.34■□□□□ 0.05
NPC1-201ENST00000269228 KIAA0753Q2KHM9 967 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 GNPTABQ3T906 1256 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 APBB1IPQ7Z5R6 666 aaPredicted RBP15.34■□□□□ 0.05
NPC1-201ENST00000269228 NEK8Q86SG6 692 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 LMBRD1Q9NUN5 540 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 GUCA1BQ9UMX6 200 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 EXOC7Q9UPT5 735 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 CDHR2Q9BYE9 1310 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 RGS12O14924 1447 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 MTX1Q13505 466 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 KCTD1Q719H9 257 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 NCAPG2Q86XI2 1143 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 LZTFL1Q9NQ48 299 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 CALUO43852 315 aaPredicted RBP15.34■□□□□ 0.05
NPC1-201ENST00000269228 SORBS3O60504 671 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 KARSQ15046 597 aaKnown RBP15.34■□□□□ 0.05
NPC1-201ENST00000269228 PCDHA12Q9UN75 941 aa15.34■□□□□ 0.05
NPC1-201ENST00000269228 PABPC4Q13310 644 aaKnown RBP eCLIP15.33■□□□□ 0.05
NPC1-201ENST00000269228 PKP1Q13835 747 aa15.33■□□□□ 0.05
NPC1-201ENST00000269228 ZRSR2Q15696 482 aaKnown RBP15.33■□□□□ 0.05
NPC1-201ENST00000269228 RBSNQ9H1K0 784 aa15.33■□□□□ 0.05
NPC1-201ENST00000269228 WDR44Q5JSH3 913 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 GPATCH4Q5T3I0 446 aaKnown RBP15.33■□□□□ 0.04
NPC1-201ENST00000269228 ADALQ6DHV7 355 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 CNGA4Q8IV77 575 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 DYDC1Q8WWB3 177 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 MRPL44Q9H9J2 332 aaKnown RBP15.33■□□□□ 0.04
NPC1-201ENST00000269228 KANSL2Q9H9L4 492 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 SPATA31A6Q5VVP1 1343 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 GOLGA6L10A0A0M3HER8 536 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 GCNT3O95395 438 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 MIGA2Q7L4E1 593 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 NT5C3AQ9H0P0 336 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 SPATA31A1Q5TZJ5 1347 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 NFIXQ14938 502 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 SLFNL1Q499Z3 407 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 FBXO18Q8NFZ0 1043 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 FERMT1Q9BQL6 677 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 AMNQ9BXJ7 453 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.04
NPC1-201ENST00000269228 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.04
NPC1-201ENST00000269228 CEP83Q9Y592 693 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 DIP2BQ9P265 1576 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 CPS1P31327 1500 aa15.33■□□□□ 0.04
NPC1-201ENST00000269228 PFKFB1P16118 471 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 PRDX5P30044 214 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 SLC16A2P36021 539 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 NLRP12P59046 1061 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 SUPT20HL1Q3ZLR7 823 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 IGSF22Q8N9C0 903 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 MARCH10Q8NA82 808 aaPredicted RBP15.32■□□□□ 0.04
NPC1-201ENST00000269228 MLXIPQ9HAP2 919 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 NFE2L3Q9Y4A8 694 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 KRT5P13647 590 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 PNOCQ13519 176 aa15.32■□□□□ 0.04
NPC1-201ENST00000269228 ZSWIM5Q9P217 1185 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms