RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 USHBP1Q8N6Y0 703 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ZNF280CQ8ND82 737 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 SNRKQ9NRH2 765 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 CTTNBP2NLQ9P2B4 639 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 NUP153P49790 1475 aaKnown RBP6.3□□□□□ -1.4
VCAN-201ENST00000265077 RASSF2P50749 326 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 SND1Q7KZF4 910 aaKnown RBP eCLIP6.3□□□□□ -1.45e-7■■■■■ 28.2
VCAN-201ENST00000265077 UNC45AQ9H3U1 944 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 PPANQ9NQ55 473 aaKnown RBP6.3□□□□□ -1.4
VCAN-201ENST00000265077 SAMD9Q5K651 1589 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 VPS41P49754 854 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 SLC9C2Q5TAH2 1124 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.29□□□□□ -1.4
VCAN-201ENST00000265077 NFE2L3Q9Y4A8 694 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 ATP1A2P50993 1020 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 MTMR3Q13615 1198 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 UBLCP1Q8WVY7 318 aaPredicted RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 LZICQ8WZA0 190 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 RRP36Q96EU6 259 aaKnown RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 DRC3Q9H069 523 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 VAT1LQ9HCJ6 419 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 APBA1Q02410 837 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 POSTNQ15063 836 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 IFT81Q8WYA0 676 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 CABP5Q9NP86 173 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 COMMD10Q9Y6G5 202 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 PLCH2O75038 1416 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 EEF2P13639 858 aaKnown RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 OLFML1Q6UWY5 402 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 CCDC84Q86UT8 332 aaPredicted RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 ZCCHC17Q9NP64 241 aaKnown RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 ZNF711Q9Y462 761 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 NUB1Q9Y5A7 615 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 STXBP3O00186 592 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 GJA8P48165 433 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 PPP1R13BQ96KQ4 1090 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 TXNDC16Q9P2K2 825 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 A0A1B0GVL5 298 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 ATP5J2-PTCD1G3V325 749 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 RAPGEF3O95398 923 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 PRR29P0C7W0 189 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 ARID5AQ03989 594 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 MAP7D3Q8IWC1 876 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 GFM2Q969S9 779 aaKnown RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 CFAP221Q4G0U5 840 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 FYB2Q5VWT5 728 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 TRIM74Q86UV6 250 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 TRIM73Q86UV7 250 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 ATP6V0A2Q9Y487 856 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 SGSM2O43147 1006 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 TMCC1O94876 653 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 HEATR3Q7Z4Q2 680 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 MSL3Q8N5Y2 521 aaKnown RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 TEX9Q8N6V9 391 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 SPDYE1Q8NFV5 336 aaPredicted RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 CYP7A1P22680 504 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 CCT6AP40227 531 aaKnown RBP6.29□□□□□ -1.4
VCAN-201ENST00000265077 PPP1R21Q6ZMI0 780 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 SGSM3Q96HU1 749 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 KCNK9Q9NPC2 374 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 CTNND2Q9UQB3 1225 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 TRAPPC8Q9Y2L5 1435 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 DEXIO95424 95 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 SLC9C1Q4G0N8 1177 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 AMOTL2Q9Y2J4 779 aa6.29□□□□□ -1.4
VCAN-201ENST00000265077 TSPOAP1O95153 1857 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 CFAP157Q5JU67 520 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 CCDC25Q86WR0 208 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 VSIG1Q86XK7 387 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 MAGEB6P1A0A0J9YX57 407 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 ZRANB2O95218 330 aaKnown RBP eCLIP6.28□□□□□ -1.4
VCAN-201ENST00000265077 NME8Q8N427 588 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 KIFAP3Q92845 792 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 ABCC10Q5T3U5 1492 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 PABPN1LA6NDY0 278 aaKnown RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 B4DLN1 442 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 SLC27A2O14975 620 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 MRPL12P52815 198 aaKnown RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 HAUS3Q68CZ6 603 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 FAM135BQ49AJ0 1406 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 E2F6O75461 281 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 GPTP24298 496 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 PAK2Q13177 524 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 GSDMBQ8TAX9 411 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 ARHGEF2Q92974 986 aaKnown RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 HOOK2Q96ED9 719 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 SPHKAPQ2M3C7 1700 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 VCAM1P19320 739 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
VCAN-201ENST00000265077 MFN1Q8IWA4 741 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 TRIML1Q8N9V2 468 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 PARD6BQ9BYG5 372 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 SCINQ9Y6U3 715 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 EIF4G3O43432 1585 aaKnown RBP6.28□□□□□ -1.4
VCAN-201ENST00000265077 SPDYE3A6NKU9 549 aa6.28□□□□□ -1.4
VCAN-201ENST00000265077 TMED10P49755 219 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms