RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 PICALMQ13492 652 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 INF2Q27J81 1249 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 NAPGQ99747 312 aaPredicted RBP18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 TRPC5Q9UL62 973 aaPredicted RBP18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 GDAQ9Y2T3 454 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 RIPOR2Q9Y4F9 1068 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 MEGF6O75095 1541 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 CYP2D6P10635 497 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 TFAP4Q01664 338 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 FOXP4Q8IVH2 680 aaPredicted RBP18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 CEP112Q8N8E3 955 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 EPB41L4AQ9HCS5 686 aaPredicted RBP18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 H0YHG0 523 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 NCAPH2Q6IBW4 605 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
PDZRN3-201ENST00000263666 GSG1L2A8MUP6 293 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 STX10O60499 249 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 CRKLP46109 303 aaKnown RBP18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 TFR2Q9UP52 801 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 PARP10Q53GL7 1025 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 TRIM49BA6NDI0 452 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 NCAPHQ15003 741 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 LONRF2Q1L5Z9 754 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 ZSCAN29Q8IWY8 852 aaPredicted RBP18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 CSGALNACT2Q8N6G5 542 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 NYXQ9GZU5 481 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 PDE4DQ08499 809 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 MORC3Q14149 939 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 TSPYL1Q9H0U9 437 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 FAM207AQ9NSI2 230 aaPredicted RBP18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 TBC1D7Q9P0N9 293 aa18.22■□□□□ 0.51
PDZRN3-201ENST00000263666 MROH5Q6ZUA9 1318 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 PP2D1A8MPX8 630 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 KCNJ18B7U540 433 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 PTPREP23469 700 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 TXKP42681 527 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 KCNJ12Q14500 433 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 SPATA1Q5VX52 437 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 NKX2-3Q8TAU0 364 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 GBP3Q9H0R5 595 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 MAPKAPK5Q8IW41 473 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 PLCD3Q8N3E9 789 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 CCDC42Q96M95 316 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 MRPL44Q9H9J2 332 aaKnown RBP18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 SEPT11Q9NVA2 429 aaKnown RBP18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 SUGCTQ9HAC7 445 aa18.21■□□□□ 0.51
PDZRN3-201ENST00000263666 TXLNBQ8N3L3 684 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 GPR161Q8N6U8 529 aaKnown RBP18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 MORC2Q9Y6X9 1032 aaPredicted RBP18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 MON2Q7Z3U7 1717 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 APBA3O96018 575 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 HNRNPH2P55795 449 aaKnown RBP18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 CYP27A1Q02318 531 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 CCDC40Q4G0X9 1142 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 PAGE5Q96GU1 130 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 TNNI2P48788 182 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 SPAG1Q07617 926 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 CUL4BQ13620 913 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
PDZRN3-201ENST00000263666 SRGAP2O75044 1071 aa18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 GPR101Q96P66 508 aaPredicted RBP18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 TCERG1LQ5VWI1 586 aa18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 CCNT1O60563 726 aaKnown RBP18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 TRIM37O94972 964 aa18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 ZSCAN26Q16670 478 aa18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 RMND1Q9NWS8 449 aa18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 ENOX1Q8TC92 643 aaKnown RBP18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 NOC4LQ9BVI4 516 aaKnown RBP18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 FOXP1Q9H334 677 aaPredicted RBP18.19■□□□□ 0.5
PDZRN3-201ENST00000263666 A0A0U1RQJ8 604 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 TUBB4AP04350 444 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 SF3A3Q12874 501 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 HDXQ7Z353 690 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 ATRIPQ8WXE1 791 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 PHLPP2Q6ZVD8 1323 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 LIFRP42702 1097 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 KIF5AQ12840 1032 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 SYCP1Q15431 976 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 TTC19Q6DKK2 380 aaPredicted RBP18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 CYP26C1Q6V0L0 522 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 BCCIPQ9P287 314 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 SRPRBQ9Y5M8 271 aaKnown RBP18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 BMP15O95972 392 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 HLTFQ14527 1009 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 TGFBRAP1Q8WUH2 860 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 CALML4Q96GE6 196 aa18.18■□□□□ 0.5
PDZRN3-201ENST00000263666 KCNQ2O43526 872 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 USP17L8P0C7I0 530 aa18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 CYLC1P35663 651 aaPredicted RBP18.17■□□□□ 0.5
PDZRN3-201ENST00000263666 SEPT12Q8IYM1 358 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms