RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 CAP1Q01518 475 aa20.67■□□□□ 0.9
MRPL28-201ENST00000199706 MKL1Q969V6 931 aa20.67■□□□□ 0.9
MRPL28-201ENST00000199706 GOPCQ9HD26 462 aa20.67■□□□□ 0.9
MRPL28-201ENST00000199706 PTPN22Q9Y2R2 807 aa20.67■□□□□ 0.9
MRPL28-201ENST00000199706 HOXD10P28358 340 aa20.66■□□□□ 0.9
MRPL28-201ENST00000199706 FCGRTP55899 365 aa20.66■□□□□ 0.9
MRPL28-201ENST00000199706 RNF41Q9H4P4 317 aaPredicted RBP20.66■□□□□ 0.9
MRPL28-201ENST00000199706 MTMR4Q9NYA4 1195 aa20.66■□□□□ 0.9
MRPL28-201ENST00000199706 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
MRPL28-201ENST00000199706 PRDM1O75626 825 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 TSPY3P0CV98 308 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 TSPY8P0CW00 308 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 PSMC4P43686 418 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 NOVP48745 357 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 ZYXQ15942 572 aaKnown RBP20.65■□□□□ 0.9
MRPL28-201ENST00000199706 CLEC10AQ8IUN9 316 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 ANKRD13CQ8N6S4 541 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 STAG1Q8WVM7 1258 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 TRIM47Q96LD4 638 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 P2RX7Q99572 595 aaKnown RBP20.65■□□□□ 0.9
MRPL28-201ENST00000199706 RPAP3Q9H6T3 665 aaPredicted RBP20.65■□□□□ 0.9
MRPL28-201ENST00000199706 HPS5Q9UPZ3 1129 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 RABGAP1Q9Y3P9 1069 aa20.65■□□□□ 0.9
MRPL28-201ENST00000199706 TTLL1O95922 423 aa20.64■□□□□ 0.89
MRPL28-201ENST00000199706 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
MRPL28-201ENST00000199706 ARHGAP39Q9C0H5 1083 aa20.64■□□□□ 0.89
MRPL28-201ENST00000199706 SRRDQ9UH36 339 aa20.64■□□□□ 0.89
MRPL28-201ENST00000199706 SGSM2O43147 1006 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 CTGFP29279 349 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 TFAP4Q01664 338 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 CTDSPL2Q05D32 466 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 AKNAD1Q5T1N1 836 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 MB21D1Q8N884 522 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 GMCL1P1Q8NEA9 526 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 GPRC5AQ8NFJ5 357 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 ARMC5Q96C12 935 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 HOXC10Q9NYD6 342 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 DOCK3Q8IZD9 2030 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 CENPFP49454 3210 aa20.63■□□□□ 0.89
MRPL28-201ENST00000199706 RBBP6Q7Z6E9 1792 aaKnown RBP20.62■□□□□ 0.89
MRPL28-201ENST00000199706 SPDYE16A6NNV3 312 aaPredicted RBP20.62■□□□□ 0.89
MRPL28-201ENST00000199706 COG2Q14746 738 aa20.62■□□□□ 0.89
MRPL28-201ENST00000199706 KIAA1755Q5JYT7 1200 aa20.62■□□□□ 0.89
MRPL28-201ENST00000199706 NBPF3Q9H094 633 aa20.62■□□□□ 0.89
MRPL28-201ENST00000199706 IL25Q9H293 177 aa20.62■□□□□ 0.89
MRPL28-201ENST00000199706 TCP11L1Q9NUJ3 509 aa20.62■□□□□ 0.89
MRPL28-201ENST00000199706 RBPJLQ9UBG7 517 aa20.62■□□□□ 0.89
MRPL28-201ENST00000199706 TSPY2A6NKD2 308 aa20.61■□□□□ 0.89
MRPL28-201ENST00000199706 ZNF213O14771 459 aa20.61■□□□□ 0.89
MRPL28-201ENST00000199706 FMNL1O95466 1100 aaPredicted RBP20.61■□□□□ 0.89
MRPL28-201ENST00000199706 ERVK-9P63128 1117 aa20.61■□□□□ 0.89
MRPL28-201ENST00000199706 ERVK-24P63145 666 aa20.61■□□□□ 0.89
MRPL28-201ENST00000199706 IMMTQ16891 758 aaKnown RBP20.61■□□□□ 0.89
MRPL28-201ENST00000199706 MFSD6Q6ZSS7 791 aa20.61■□□□□ 0.89
MRPL28-201ENST00000199706 STK11IPQ8N1F8 1099 aa20.61■□□□□ 0.89
MRPL28-201ENST00000199706 TANGO6Q9C0B7 1094 aa20.61■□□□□ 0.89
MRPL28-201ENST00000199706 TNPO2O14787 897 aaKnown RBP20.6■□□□□ 0.89
MRPL28-201ENST00000199706 MAPK4P31152 587 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 CCNA1P78396 465 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 IRF5Q13568 498 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 POTEEQ6S8J3 1075 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 TBC1D10CQ8IV04 446 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 TXNRD2Q9NNW7 524 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 PPP4R2Q9NY27 417 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 ADAMTS5Q9UNA0 930 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 TACC3Q9Y6A5 838 aa20.6■□□□□ 0.89
MRPL28-201ENST00000199706 F5H6K3 240 aa20.59■□□□□ 0.89
MRPL28-201ENST00000199706 RANBP6O60518 1105 aaKnown RBP20.59■□□□□ 0.89
MRPL28-201ENST00000199706 NDUFB10O96000 172 aa20.59■□□□□ 0.89
MRPL28-201ENST00000199706 KLRC3Q07444 240 aa20.59■□□□□ 0.89
MRPL28-201ENST00000199706 FAM47AQ5JRC9 791 aa20.59■□□□□ 0.89
MRPL28-201ENST00000199706 COA7Q96BR5 231 aa20.59■□□□□ 0.89
MRPL28-201ENST00000199706 CLIP2Q9UDT6 1046 aa20.59■□□□□ 0.89
MRPL28-201ENST00000199706 ZNF236Q9UL36 1845 aa20.59■□□□□ 0.89
MRPL28-201ENST00000199706 CNMDO75829 334 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 DSG3P32926 999 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 HAND2P61296 217 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 SPICE1Q8N0Z3 855 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 ESR2Q92731 530 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 GMCL1Q96IK5 515 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 IL17RBQ9NRM6 502 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 PTCH2Q9Y6C5 1203 aa20.58■□□□□ 0.89
MRPL28-201ENST00000199706 U3KPZ7 1027 aaPredicted RBP20.58■□□□□ 0.89
MRPL28-201ENST00000199706 PLXNB2O15031 1838 aa20.57■□□□□ 0.88
MRPL28-201ENST00000199706 FLOT1O75955 427 aa20.57■□□□□ 0.88
MRPL28-201ENST00000199706 SOCS4Q8WXH5 440 aa20.57■□□□□ 0.88
MRPL28-201ENST00000199706 TTC14Q96N46 770 aa20.57■□□□□ 0.88
MRPL28-201ENST00000199706 PPP1R9AQ9ULJ8 1098 aa20.57■□□□□ 0.88
MRPL28-201ENST00000199706 COL11A1P12107 1806 aaPredicted RBP20.56■□□□□ 0.88
MRPL28-201ENST00000199706 PRKCZQ05513 592 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 SLC9C1Q4G0N8 1177 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 CCDC178Q5BJE1 867 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 NBPF11Q86T75 865 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 SLAIN1Q8ND83 568 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 SHCBP1Q8NEM2 672 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 PXYLP1Q8TE99 480 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 INCENPQ9NQS7 918 aa20.56■□□□□ 0.88
MRPL28-201ENST00000199706 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms