RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Fhdc1Q3ULZ2 1149 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Nsrp1Q5NCR9 542 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Cdc37Q61081 379 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Rhpn1Q61085 643 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ube2oQ6ZPJ3 1288 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 OplahQ8K010 1288 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Hs2st1Q8R3H7 356 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ltbp2O08999 1813 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Zfp853A0A1D5RM95 733 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Armc3A2AU72 881 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Serpina16D3Z660 418 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ythdc1E9Q5K9 736 aaKnown RBP15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Aco1P28271 889 aaKnown RBP15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Slc9a1Q61165 820 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Usp49Q6P9L4 685 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Atp2b4Q6Q477 1205 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Anks1bQ8BIZ1 1259 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Nod2Q8K3Z0 1020 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Grpel1Q99LP6 217 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Scrn1Q9CZC8 414 aa15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Akap8Q9DBR0 687 aaKnown RBP15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Gtf2iQ9ESZ8 998 aaKnown RBP15.17■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Sned1Q70E20 1403 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Jakmip2D3YXK0 820 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Gm10134F6ZQC6 126 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Arid4aF8VPQ2 1261 aaKnown RBP15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ppef2O35385 757 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Myo1aO88329 1043 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Scnn1aQ61180 699 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Grm4Q68EF4 912 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 SltmQ8CH25 1031 aaKnown RBP15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Fermt2Q8CIB5 680 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 LpxnQ99N69 386 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Zbed3Q9D0L1 228 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Tubb4aQ9D6F9 444 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ripk4Q9ERK0 786 aa15.16■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Scn9aQ62205 1984 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Il7P10168 154 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Gna11P21278 359 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Cdh15P33146 784 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Adck2Q6NSR3 617 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ankrd13aQ80UP5 588 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Asnsd1Q8BFS9 627 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Larp6Q8BN59 492 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Cdan1Q8CC12 1239 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Sugp2Q8CH09 1067 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 E2f4Q8R0K9 410 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Mrps25Q9D125 171 aaKnown RBP15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Arl6ip4Q9JM93 229 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ubxn8Q9QZ49 277 aa15.15■□□□□ 0.02
Pdlim5-208ENSMUST00000196220 Ccdc121E9Q6D3 323 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Pdia4P08003 638 aaKnown RBP15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 LtkP08923 888 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Wnt7aP24383 349 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Nbr1P97432 988 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Tm4sf1Q64302 202 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Tacc1Q6Y685 774 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Znf18Q810A1 556 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Tmem60Q8K174 133 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 TbcbQ9D1E6 244 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Cbx6Q9DBY5 414 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Trmt112Q9DCG9 125 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Hip1rQ9JKY5 1068 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Col2a1P28481 1487 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Zfp831A2ADM8 1628 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Cdc27A2A6Q5 825 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Gucy1a2F8VQK3 730 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 GmnnO88513 206 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Alppl2P24823 529 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Terf1P70371 421 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Gjb4Q02738 266 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 C87499Q3UX49 493 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Rc3h1Q4VGL6 1130 aaKnown RBP15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Lamc2Q61092 1191 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Panx2Q6IMP4 677 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Trmt2aQ8BNV1 574 aaKnown RBP15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Cfap45Q9D9U9 551 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Tfap4Q9JIZ5 338 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Gm5114W4VSN8 858 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Tsc2Q61037 1814 aa15.14■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Ubap1lG3UW59 384 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Nfil3O08750 462 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Adssl1P28650 457 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Fdx1P46656 188 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Nek1P51954 1203 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Ankk1Q8BZ25 745 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Mtmr4Q91XS1 1190 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Jag1Q9QXX0 1218 aa15.13■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Eef2P58252 858 aaKnown RBP15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Dok7Q18PE0 504 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Tbc1d2bQ3U0J8 965 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Sval3Q76I99 144 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Arid5bQ8BM75 1188 aaKnown RBP15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Gga3Q8BMI3 718 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Apobec3Q99J72 440 aaKnown RBP15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Clstn1Q9EPL2 979 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Nr2e3Q9QXZ7 395 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Myh8P13542 1937 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Nrxn2E9Q7X7 1710 aa15.12■□□□□ 0.01
Pdlim5-208ENSMUST00000196220 Cul4bA2A432 970 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms