RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Rbbp5Q8BX09 538 aaKnown RBP8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cwf19l1Q8CI33 537 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Lrrc45Q8CIM1 670 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ccdc14Q8K2J4 934 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cabp4Q8VHC5 271 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Txndc5Q91W90 417 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Trim11Q99PQ2 467 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Nfs1Q9Z1J3 459 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Net1Q9Z206 595 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Scgb2b18A0A087WPA9 112 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Apol8A2VDH7 339 aaKnown RBP8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Adam1aQ60813 791 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tbc1d1Q60949 1255 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Prpf40bQ80W14 870 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Spice1Q8C804 860 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Spata4Q8K3V1 295 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Bzw1Q9CQC6 419 aaKnown RBP8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sept3Q9Z1S5 350 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Impdh2P24547 514 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Trmt1Q3TX08 663 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Drc1Q3USS3 753 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Skap1Q3UUV5 355 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Prdm1Q60636 856 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 ChukQ60680 745 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Lrrn2Q6PHP6 730 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Hook2Q7TMK6 716 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Vps53Q8CCB4 832 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Calr3Q9D9Q6 380 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Med1Q925J9 1575 aa8.5□□□□□ -1.05
Bdnf-209ENSMUST00000111050 ChkbO55229 394 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Klrb1Q0ZUP1 214 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Olfr121Q5CZY0 321 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ddx3yQ62095 658 aaKnown RBP8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Znf131Q8K3J5 619 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Dnajc17Q91WT4 303 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sugt1Q9CX34 336 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Copb1Q9JIF7 953 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Kif1aP33173 1695 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Myh7bA2AQP0 1941 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tmem2Q5FWI3 1383 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Speer4aF8VPX6 267 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Opa1P58281 960 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sun3Q5SS91 320 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Trpc6Q61143 930 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ehbp1Q69ZW3 1231 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Xlr3bQ6P205 226 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Usp20Q8C6M1 916 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 DymQ8CHY3 669 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sil1Q9EPK6 465 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Slc40a1Q9JHI9 570 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cul4bA2A432 970 aaKnown RBP8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Acad12D3Z7X0 555 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pdzrn4E9PUZ9 1014 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Kif23E9Q5G3 953 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ube3aO08759 870 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Hdhd2Q3UGR5 259 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cyb5d1Q5NCY3 228 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Serpinb1cQ5SV42 375 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Tekt3Q6X6Z7 490 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Jade2Q6ZQF7 829 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Acad11Q80XL6 779 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Map10Q8BJS7 891 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Dis3l2Q8CI75 870 aaKnown RBP8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Trim42Q9D2H5 723 aa8.49□□□□□ -1.05
Bdnf-209ENSMUST00000111050 RpsaP14206 295 aaKnown RBP8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Pde6bP23440 856 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 GpkowQ56A08 488 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Shisa4Q8CA71 197 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Kcnj14Q8JZN3 434 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 NenfQ9CQ45 171 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Lrrc34Q9DAM1 415 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 JcadQ5DTX6 1320 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Nckap5lQ6GQX2 1323 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sik3Q6P4S6 1311 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cep85lA0A1W2P884 806 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Me1P06801 572 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ighmbp2P40694 993 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 LtbrP50284 415 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Casp4P70343 373 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Orc2Q60862 576 aaKnown RBP8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Fbxo38Q8BMI0 1194 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Ttc26Q8BS45 554 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Exd1Q8CDF7 570 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Mmgt1Q8K273 131 aaKnown RBP8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cep72Q9D3R3 646 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 UvssaQ9D479 717 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Spata1Q9D5R4 444 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Cul5Q9D5V5 780 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sept14Q9DA97 430 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Bub1bQ9Z1S0 1052 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Npc1l1Q6T3U4 1333 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Metap2O08663 478 aaKnown RBP8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 ByslO54825 436 aaKnown RBP8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Rps6ka3P18654 740 aaKnown RBP8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Rhpn1Q61085 643 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Sema4bQ62179 823 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Olfr119Q7TRJ5 321 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Csrnp2Q8BGQ2 534 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 3830417A13RikQ8BQJ2 303 aa8.48□□□□□ -1.05
Bdnf-209ENSMUST00000111050 Q8C5C9 218 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms