RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Sema3fO88632 785 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Kmt5bQ3U8K7 883 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Unc93aQ710D3 458 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Naa30Q8CES0 364 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Ccer1Q9CQL2 403 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Tfcp2Q9ERA0 502 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 AllcQ9JHX6 414 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Zbtb22Q9Z0G7 638 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Igsf9bE9PZ19 1328 aa24.39■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Clrn2B2RVW2 232 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Nfil3O08750 462 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Sec62Q8BU14 398 aaKnown RBP24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Kdm4aQ8BW72 1064 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Wdr24Q8CFJ9 790 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Q8K2W9 541 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Etnk1Q9D4V0 363 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Col4a3bpQ9EQG9 624 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Tfap4Q9JIZ5 338 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Pcdh15Q99PJ1 1943 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Kif3aP28741 701 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Sema3eP70275 775 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Tmem130Q6NXM3 419 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Clic4Q9QYB1 253 aa24.38■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Sept2P42208 361 aaKnown RBP24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Fam89aQ14BJ1 175 aa24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Grm4Q68EF4 912 aa24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Lrrc15Q80X72 579 aa24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Samm50Q8BGH2 469 aa24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Kiaa1524Q8BWY9 907 aa24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Arhgef6Q8K4I3 771 aa24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Yeats4Q9CR11 227 aaKnown RBP24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Zcchc17Q9ESX4 241 aaKnown RBP24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Fam205a1D3YZF6 1314 aa24.37■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Gm30191A0A0U1RNT7 187 aa24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Fgl2P12804 432 aa24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Haus6Q6NV99 933 aaKnown RBP24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Scfd1Q8BRF7 639 aaKnown RBP24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Epha10Q8BYG9 1007 aa24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Stk38Q91VJ4 465 aa24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Ddx20Q9JJY4 825 aaKnown RBP24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Myh7bA2AQP0 1941 aa24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Scn10aQ6QIY3 1958 aa24.36■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Epha2Q03145 977 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Galnt17Q7TT15 598 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Txnrd2Q9JLT4 524 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 B3galt4Q9Z0F0 371 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Dnai2A2AC93 623 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 CtshP49935 333 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Slc9c1Q6UJY2 1175 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Zscan22Q8BGS5 496 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Bicd2Q921C5 820 aa24.35■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Atrnl1Q6A051 1378 aa24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Ampd3O08739 766 aa24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 CebpaP53566 359 aa24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Eif5P59325 429 aaKnown RBP24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 D630036H23RikQ3UQD6 204 aa24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Dnaaf2Q8BPI1 814 aa24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Aldh1b1Q9CZS1 519 aa24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Cry2Q9R194 592 aa24.34■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Mars2Q499X9 586 aaKnown RBP24.33■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Akap4Q60662 849 aa24.33■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 NenfQ9CQ45 171 aa24.33■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Cd2apQ9JLQ0 637 aa24.33■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Psmd10Q9Z2X2 231 aa24.33■■□□□ 1.49
Ccdc88a-202ENSMUST00000109477 Abhd15Q5F2F2 459 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Ndufb9Q9CQJ8 179 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Telo2Q9DC40 840 aaKnown RBP24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 1700113H08RikE9Q9Q5 327 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Mboat4P0C7A3 435 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Sptlc2P97363 560 aaKnown RBP24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Gm11437Q5QR91 290 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Rhpn1Q61085 643 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Casc1Q6TDU8 730 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Tspyl4Q8VD63 406 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Gpsm2Q8VDU0 679 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Trex1Q91XB0 314 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Gm5114W4VSN8 858 aa24.32■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 PgfP49764 158 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Cyp4x1Q6A152 507 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Epc2Q8C0I4 808 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Cdan1Q8CC12 1239 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Riox2Q8CD15 465 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 SltmQ8CH25 1031 aaKnown RBP24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Inpp5bQ8K337 993 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 GrapQ9CX99 217 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 4931400O07RikQ9D4M5 137 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Inpp4aQ9EPW0 939 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Homer1Q9Z2Y3 366 aa24.31■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Syce3B5KM66 88 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Pcmtd1P59913 357 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Lilrb3P97484 841 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Sap30bpQ02614 308 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Eme2Q56A04 373 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Isy1Q69ZQ2 285 aaKnown RBP24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Adgrg6Q6F3F9 1165 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Mapk4Q6P5G0 583 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Eid1Q9DCR4 169 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Acot3Q9QYR7 432 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 Ube2oQ6ZPJ3 1288 aa24.3■■□□□ 1.48
Ccdc88a-202ENSMUST00000109477 PdcQ9QW08 244 aa24.3■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 223.1 ms