RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 PRAG1Q571I4 1179 aa23.52■■□□□ 1.36
Cdx1-201ENSMUST00000025521 Nell2Q61220 819 aa23.52■■□□□ 1.36
Cdx1-201ENSMUST00000025521 LRWD1Q8BUI3 648 aaKnown RBP23.52■■□□□ 1.36
Cdx1-201ENSMUST00000025521 ParnQ8VDG3 624 aa23.52■■□□□ 1.36
Cdx1-201ENSMUST00000025521 Hip1rQ9JKY5 1068 aa23.52■■□□□ 1.36
Cdx1-201ENSMUST00000025521 Grem2O88273 168 aa23.51■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Armc2Q3URY6 854 aa23.51■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Asnsd1Q8BFS9 627 aa23.51■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Apobec3Q99J72 440 aaKnown RBP23.51■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Scrn1Q9CZC8 414 aa23.51■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Psmd10Q9Z2X2 231 aa23.51■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Frmpd4A2AFR3 1320 aa23.51■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Ubap1lG3UW59 384 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Vmn2r68L7N2B3 851 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Slc9a1Q61165 820 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 E2f4Q8R0K9 410 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Gucy1a2F8VQK3 730 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Fam178bQ24JP3 464 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Rc3h1Q4VGL6 1130 aaKnown RBP23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Nsrp1Q5NCR9 542 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Lca5Q80ST9 704 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Lrrc15Q80X72 579 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Anks1bQ8BIZ1 1259 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Gga3Q8BMI3 718 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Tmem60Q8K174 133 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Jag1Q9QXX0 1218 aa23.5■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Zfp853A0A1D5RM95 733 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Aco1P28271 889 aaKnown RBP23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Cdh15P33146 784 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Fam198bQ3UPI1 517 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Kiaa0319Q5SZV5 1081 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Cbx6Q9DBY5 414 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Clstn1Q9EPL2 979 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Ubxn8Q9QZ49 277 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Psme4Q5SSW2 1843 aa23.49■■□□□ 1.35
Cdx1-201ENSMUST00000025521 A0A1W2P6Q8 802 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Gm9048A0A1W2P7H4 802 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 A0A1W2P7Z8 802 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Gm9046A0A1W2P855 802 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 LdhaP06151 332 aaKnown RBP23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Nek1P51954 1203 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Usp5P56399 858 aaKnown RBP23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Fhdc1Q3ULZ2 1149 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Panx2Q6IMP4 677 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Ankrd13aQ80UP5 588 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Clic6Q8BHB9 596 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 LpxnQ99N69 386 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Cyp2ab1S4R196 498 aa23.48■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Serpina16D3Z660 418 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Il7P10168 154 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Mns1Q61884 491 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Adck2Q6NSR3 617 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Galnt17Q7TT15 598 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Ankk1Q8BZ25 745 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Lonrf3Q9D4H7 753 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Akap8Q9DBR0 687 aaKnown RBP23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Pla2g4bP0C871 782 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Gcnt1Q09324 428 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Rbm12b2Q66JV4 834 aaKnown RBP23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Pcdhb5Q91XZ5 792 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Xrcc4Q924T3 326 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Gtf2iQ9ESZ8 998 aaKnown RBP23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Magi2Q9WVQ1 1275 aa23.47■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Sned1Q70E20 1403 aa23.46■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Sema3fO88632 785 aa23.46■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Alppl2P24823 529 aa23.46■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Jdp2P97875 163 aa23.46■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Rhpn1Q61085 643 aa23.46■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Grm4Q68EF4 912 aa23.46■■□□□ 1.35
Cdx1-201ENSMUST00000025521 Jakmip2D3YXK0 820 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Usp17lbE9Q9U0 468 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Arid4aF8VPQ2 1261 aaKnown RBP23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Myo1aO88329 1043 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 GmnnO88513 206 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Trim30aP15533 496 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Adssl1P28650 457 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Tm4sf1Q64302 202 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 GnptabQ69ZN6 1235 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Tacc1Q6Y685 774 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Rbm42Q91V81 474 aaKnown RBP23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Zbed3Q9D0L1 228 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Cul4bA2A432 970 aaKnown RBP23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Nfil3O08750 462 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 LtbrP50284 415 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Epha10Q8BYG9 1007 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Klhl30Q8C3F7 581 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Sugp2Q8CH09 1067 aa23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Rbm10Q99KG3 930 aaKnown RBP23.45■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Znf568E9PYI1 671 aa23.44■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Krt39Q6IFX4 482 aa23.44■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Sval3Q76I99 144 aa23.44■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Fermt2Q8CIB5 680 aa23.44■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Sgpp1Q9JI99 430 aa23.44■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Ces1aE9PYP1 563 aa23.43■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Dok7Q18PE0 504 aa23.43■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Pspc1Q8R326 523 aaKnown RBP23.43■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Hs2st1Q8R3H7 356 aa23.43■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Trmt112Q9DCG9 125 aa23.43■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Tfap4Q9JIZ5 338 aa23.43■■□□□ 1.34
Cdx1-201ENSMUST00000025521 Btaf1E9QAE3 1848 aa23.43■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms