RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 BaatQ91X34 420 aa18.69■□□□□ 0.58
Ubb-201ENSMUST00000019649 Sil1Q9EPK6 465 aa18.69■□□□□ 0.58
Ubb-201ENSMUST00000019649 Pmfbp1Q9WVQ0 1022 aa18.69■□□□□ 0.58
Ubb-201ENSMUST00000019649 Ulk4Q3V129 1303 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Ly6dP35459 127 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Igfbp4P47879 254 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Usp5P56399 858 aaKnown RBP18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Pls1Q3V0K9 630 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Ubap2lQ80X50 1107 aaKnown RBP18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Siglec10Q80ZE3 688 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Amer2Q8CCJ4 672 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Serpinb13Q8CDC0 389 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Pspc1Q8R326 523 aaKnown RBP18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Pcdhb22Q91XZ8 794 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Gmcl1Q920G9 524 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Tmod4Q9JLH8 345 aa18.68■□□□□ 0.58
Ubb-201ENSMUST00000019649 Ppp1r9aH3BJD6 1292 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 Gjd2O54851 321 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 Nck2O55033 380 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 Traf1P39428 409 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 Slc44a1Q6X893 653 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 Ms4a5Q810P8 197 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 Tmem47Q9JJG6 181 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 PatjQ63ZW7 1834 aa18.67■□□□□ 0.58
Ubb-201ENSMUST00000019649 Gm15262A0A140LIQ5 728 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Celf5D3Z4T1 395 aaKnown RBP18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Lipo1J3QME6 396 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Gm13128L7MU96 475 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Rabep1O35551 862 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Hoxd10P28359 340 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 GabpaQ00422 454 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Fbxo28Q8BIG4 368 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Bst2Q8R2Q8 172 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 SerhlQ9EPB5 311 aa18.66■□□□□ 0.58
Ubb-201ENSMUST00000019649 Copb2O55029 905 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Gjb1P28230 283 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Ppm1jQ149T7 507 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Rnf157Q3TEL6 685 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 ErmnQ5EBJ4 281 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Stxbp3Q60770 592 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Filip1lQ6P6L0 1131 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Usp50Q6P8X6 390 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Riox2Q8CD15 465 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Ldlrad1D3YYZ1 218 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Sp8Q8BMJ8 486 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Fez1Q8K0X8 392 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Spint1Q9R097 507 aa18.65■□□□□ 0.58
Ubb-201ENSMUST00000019649 Atp11aP98197 1187 aa18.64■□□□□ 0.57
Ubb-201ENSMUST00000019649 Vgll2Q8BGW8 322 aa18.64■□□□□ 0.57
Ubb-201ENSMUST00000019649 Dnai1Q8C0M8 701 aa18.64■□□□□ 0.57
Ubb-201ENSMUST00000019649 Pus7lQ8CE46 702 aa18.64■□□□□ 0.57
Ubb-201ENSMUST00000019649 Rnf208Q8K0W3 265 aa18.64■□□□□ 0.57
Ubb-201ENSMUST00000019649 MyripQ8K3I4 856 aa18.64■□□□□ 0.57
Ubb-201ENSMUST00000019649 Hmg20bQ9Z104 317 aa18.64■□□□□ 0.57
Ubb-201ENSMUST00000019649 Prr16A3KMN5 304 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Tph1P17532 447 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 PrkczQ02956 592 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Scg2Q03517 617 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Gm10392Q3V3I3 114 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Rnf20Q5DTM8 973 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Ppp1r26Q6A025 1163 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Haus6Q6NV99 933 aaKnown RBP18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 BcrQ6PAJ1 1270 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Tdrd3Q91W18 743 aaKnown RBP18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Mad2l2Q9D752 211 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Clstn1Q9EPL2 979 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Tjp3Q9QXY1 905 aa18.63■□□□□ 0.57
Ubb-201ENSMUST00000019649 Gm43951A0A0N4SUT6 962 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Tmigd3G3X8R9 209 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Stx8O88983 236 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Myl3P09542 204 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 TbcaP48428 108 aaKnown RBP18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Il6stQ00560 917 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Prdm1Q60636 856 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Senp7Q8BUH8 1037 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Gprasp2Q8BUY8 826 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 DnerQ8JZM4 737 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Nr3c2Q8VII8 978 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Alpk1Q9CXB8 1231 aa18.62■□□□□ 0.57
Ubb-201ENSMUST00000019649 Ripor3A1L3T7 938 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 MyocO70624 490 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 LdhbP16125 334 aaKnown RBP18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 ChgaP26339 463 aaKnown RBP18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Nf2P46662 596 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Pald1P70261 859 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Sec23aQ01405 765 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Sap30bpQ02614 308 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Atp13a3Q5XF89 1219 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 LrmpQ60664 539 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Ppp1r9bQ6R891 817 aaKnown RBP18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Terb1Q8C0V1 768 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Morc2bQ8C5W4 1022 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 E4f1Q8CCE9 783 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Ctu1Q99J10 420 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Odf2lQ9D478 642 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Tmx2Q9D710 295 aaKnown RBP18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Scn3aA2ASI5 1947 aa18.61■□□□□ 0.57
Ubb-201ENSMUST00000019649 Lig1P37913 916 aa18.6■□□□□ 0.57
Ubb-201ENSMUST00000019649 Kctd1Q5M956 257 aa18.6■□□□□ 0.57
Ubb-201ENSMUST00000019649 Jakmip1Q8BVL9 626 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms