RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 MTC7P32633 139 aa-0.54□□□□□ -2.5
snR53snR53 PAD1P33751 242 aaKnown RBP RIP-Chip data-0.54□□□□□ -2.5not detected
snR53snR53 YEN1P40028 759 aa-0.54□□□□□ -2.5
snR53snR53 SNG1P46950 547 aa-0.54□□□□□ -2.5
snR53snR53 BFA1P47113 574 aa-0.54□□□□□ -2.5
snR53snR53 AIM14P53109 570 aa-0.54□□□□□ -2.5
snR53snR53 RNH70P53331 553 aa-0.54□□□□□ -2.5
snR53snR53 YMR027WQ04371 470 aa-0.54□□□□□ -2.5
snR53snR53 TMA64Q04600 565 aaKnown RBP-0.54□□□□□ -2.5
snR53snR53 ERP1Q05359 219 aaKnown RBP-0.54□□□□□ -2.5
snR53snR53 TRE2Q08693 809 aa-0.54□□□□□ -2.5
snR53snR53 ADH2P00331 348 aaKnown RBP-0.55□□□□□ -2.5
snR53snR53 GPA1P08539 472 aa-0.55□□□□□ -2.5
snR53snR53 HMG2P12684 1045 aa-0.55□□□□□ -2.5
snR53snR53 CBP3P21560 335 aa-0.55□□□□□ -2.5
snR53snR53 GRX1P25373 110 aaKnown RBP-0.55□□□□□ -2.5
snR53snR53 ARO2P28777 376 aaKnown RBP-0.55□□□□□ -2.5
snR53snR53 IME2P32581 645 aa-0.55□□□□□ -2.5
snR53snR53 YBL059WP34224 193 aa-0.55□□□□□ -2.5
snR53snR53 SEF1P34228 1148 aa-0.55□□□□□ -2.5
snR53snR53 MIC60P36112 540 aa-0.55□□□□□ -2.5
snR53snR53 YHR131CP38835 850 aa-0.55□□□□□ -2.5
snR53snR53 LNP1P38878 278 aa-0.55□□□□□ -2.5
snR53snR53 VAC8P39968 578 aa-0.55□□□□□ -2.5
snR53snR53 ARK1P53974 638 aa-0.55□□□□□ -2.5
snR53snR53 CIA1Q05583 330 aa-0.55□□□□□ -2.5
snR53snR53 YPL191CQ08930 360 aa-0.55□□□□□ -2.5
snR53snR53 TUF1P02992 437 aaKnown RBP-0.56□□□□□ -2.5
snR53snR53 SEC12P11655 471 aa-0.56□□□□□ -2.5
snR53snR53 PRP45P28004 379 aaPredicted RBP-0.56□□□□□ -2.5
snR53snR53 HMG1P12683 1054 aa-0.57□□□□□ -2.5
snR53snR53 NDC1P32500 655 aa-0.57□□□□□ -2.5
snR53snR53 PAH1P32567 862 aa-0.57□□□□□ -2.5
snR53snR53 MOT3P54785 490 aaKnown RBP-0.57□□□□□ -2.5
snR53snR53 AYT1Q12226 474 aa-0.57□□□□□ -2.5
snR53snR53 SUP35P05453 685 aaKnown RBP-0.58□□□□□ -2.5
snR53snR53 MTF1P14908 341 aaKnown RBP-0.58□□□□□ -2.5
snR53snR53 HSP26P15992 214 aaKnown RBP RIP-Chip data-0.58□□□□□ -2.5not detected
snR53snR53 ARO9P38840 513 aaPredicted RBP-0.58□□□□□ -2.5
snR53snR53 PFS2P42841 465 aaKnown RBP-0.58□□□□□ -2.5
snR53snR53 GUF1P46943 645 aa-0.58□□□□□ -2.5
snR53snR53 SGF73P53165 657 aa-0.58□□□□□ -2.5
snR53snR53 WSC2P53832 503 aa-0.58□□□□□ -2.5
snR53snR53 RPC11Q04307 110 aaPredicted RBP-0.58□□□□□ -2.5
snR53snR53 ATG33Q06485 197 aa-0.58□□□□□ -2.5
snR53snR53 HNT3Q08702 217 aa-0.58□□□□□ -2.5
snR53snR53 HEM2P05373 342 aa-0.59□□□□□ -2.5
snR53snR53 SAG1P20840 650 aa-0.59□□□□□ -2.5
snR53snR53 MTC4P38335 694 aaKnown RBP-0.59□□□□□ -2.5
snR53snR53 ERG7P38604 731 aa-0.59□□□□□ -2.5
snR53snR53 YGP1P38616 354 aaKnown RBP-0.59□□□□□ -2.5
snR53snR53 RRP3P38712 501 aaKnown RBP-0.59□□□□□ -2.5
snR53snR53 RPT2P40327 437 aaKnown RBP-0.59□□□□□ -2.5
snR53snR53 ECM9Q02202 377 aa-0.59□□□□□ -2.5
snR53snR53 RPM2Q02773 1202 aa-0.59□□□□□ -2.5
snR53snR53 ELP3Q02908 557 aaKnown RBP-0.59□□□□□ -2.5
snR53snR53 FAP7Q12055 197 aaPredicted RBP-0.59□□□□□ -2.5
snR53snR53 EDE1P34216 1381 aa-0.59□□□□□ -2.5
snR53snR53 KGD2P19262 463 aaPredicted RBP-0.6□□□□□ -2.51
snR53snR53 GID7P25569 745 aa-0.6□□□□□ -2.51
snR53snR53 SPC110P32380 944 aa-0.6□□□□□ -2.51
snR53snR53 IES1P43579 692 aa-0.6□□□□□ -2.51
snR53snR53 YJR120WP47157 116 aa-0.6□□□□□ -2.51
snR53snR53 MAK10Q02197 733 aa-0.6□□□□□ -2.51
snR53snR53 ARP10Q04549 284 aa-0.6□□□□□ -2.51
snR53snR53 ECM7Q06200 448 aa-0.6□□□□□ -2.51
snR53snR53 YEH2Q07950 538 aa-0.6□□□□□ -2.51
snR53snR53 SWI6P09959 803 aa-0.61□□□□□ -2.51
snR53snR53 RPL20AP0CX23 172 aaKnown RBP-0.61□□□□□ -2.51
snR53snR53 RPL20BP0CX24 172 aaPredicted RBP-0.61□□□□□ -2.51
snR53snR53 RER1P25560 188 aa-0.61□□□□□ -2.51
snR53snR53 FUN19P28003 413 aaPredicted RBP-0.61□□□□□ -2.51
snR53snR53 ASF1P32447 279 aa-0.61□□□□□ -2.51
snR53snR53 FMT1P32785 401 aa-0.61□□□□□ -2.51
snR53snR53 RMA1P36001 430 aaKnown RBP-0.61□□□□□ -2.51
snR53snR53 VID24P38263 362 aa-0.61□□□□□ -2.51
snR53snR53 GDH3P39708 457 aa-0.61□□□□□ -2.51
snR53snR53 ECM11Q04110 302 aa-0.61□□□□□ -2.51
snR53snR53 JIP5Q06214 492 aaPredicted RBP-0.61□□□□□ -2.51
snR53snR53 YPQ1Q12010 308 aa-0.61□□□□□ -2.51
snR53snR53 WTM1Q12363 437 aaKnown RBP-0.61□□□□□ -2.51
snR53snR53 RQC2Q12532 1038 aaKnown RBP-0.61□□□□□ -2.51
snR53snR53 SIP1P32578 815 aa-0.62□□□□□ -2.51
snR53snR53 PTR2P32901 601 aa-0.62□□□□□ -2.51
snR53snR53 RPF2P36160 344 aaKnown RBP-0.62□□□□□ -2.51
snR53snR53 COS12P53053 380 aa-0.62□□□□□ -2.51
snR53snR53 SQS1P53866 767 aaKnown RBP-0.62□□□□□ -2.51
snR53snR53 TDA7P53882 636 aaPredicted RBP-0.62□□□□□ -2.51
snR53snR53 VPS64Q03944 604 aa-0.62□□□□□ -2.51
snR53snR53 MRPL35Q06678 367 aa-0.62□□□□□ -2.51
snR53snR53 SUL2Q12325 893 aa-0.62□□□□□ -2.51
snR53snR53 YOL098CQ12496 1037 aa-0.62□□□□□ -2.51
snR53snR53 HEM3P28789 327 aa-0.63□□□□□ -2.51
snR53snR53 ERC1P38767 581 aa-0.63□□□□□ -2.51
snR53snR53 YER130CP39959 443 aa-0.63□□□□□ -2.51
snR53snR53 HXT9P40885 567 aa-0.63□□□□□ -2.51
snR53snR53 TIM54P47045 478 aa-0.63□□□□□ -2.51
snR53snR53 MSO1P53604 210 aaKnown RBP-0.63□□□□□ -2.51
snR53snR53 ASI1P54074 624 aa-0.63□□□□□ -2.51
snR53snR53 PBA1Q05778 276 aa-0.63□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms