RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C TFC3P34111 1160 aa3.4□□□□□ -1.87
RPC40YPR110C FUN12P39730 1002 aaKnown RBP3.4□□□□□ -1.87
RPC40YPR110C FMP10P40098 244 aa3.4□□□□□ -1.87
RPC40YPR110C TMA108P40462 946 aa3.4□□□□□ -1.87
RPC40YPR110C ARC1P46672 376 aaKnown RBP3.4□□□□□ -1.87
RPC40YPR110C SAE2P46946 345 aa3.4□□□□□ -1.87
RPC40YPR110C YNR061CP53747 219 aa3.4□□□□□ -1.87
RPC40YPR110C YAT1P80235 687 aa3.4□□□□□ -1.87
RPC40YPR110C REG1Q00816 1014 aa3.4□□□□□ -1.87
RPC40YPR110C COG4Q06096 861 aa3.4□□□□□ -1.87
RPC40YPR110C ARO10Q06408 635 aa3.4□□□□□ -1.87
RPC40YPR110C SPN1Q06505 410 aaPredicted RBP3.4□□□□□ -1.87
RPC40YPR110C IMH1Q06704 911 aaKnown RBP3.4□□□□□ -1.87
RPC40YPR110C SLK19Q08581 821 aaKnown RBP3.4□□□□□ -1.87
RPC40YPR110C CDC16P09798 840 aa3.39□□□□□ -1.87
RPC40YPR110C RPL19AP0CX82 189 aaKnown RBP3.39□□□□□ -1.87
RPC40YPR110C RPL19BP0CX83 189 aaPredicted RBP3.39□□□□□ -1.87
RPC40YPR110C SRP54P20424 541 aaKnown RBP3.39□□□□□ -1.87
RPC40YPR110C MAK32P23060 363 aa3.39□□□□□ -1.87
RPC40YPR110C PAH1P32567 862 aa3.39□□□□□ -1.87
RPC40YPR110C MUD2P36084 527 aaKnown RBP3.39□□□□□ -1.87
RPC40YPR110C YJR061WP40355 935 aa3.39□□□□□ -1.87
RPC40YPR110C RPN11P43588 306 aaKnown RBP3.39□□□□□ -1.87
RPC40YPR110C UBX6P47049 396 aa3.39□□□□□ -1.87
RPC40YPR110C UPF3P48412 387 aaKnown RBP3.39□□□□□ -1.87
RPC40YPR110C RAD34Q06665 692 aa3.39□□□□□ -1.87
RPC40YPR110C CYK3Q07533 885 aa3.39□□□□□ -1.87
RPC40YPR110C PSK2Q08217 1101 aa3.39□□□□□ -1.87
RPC40YPR110C CET1O13297 549 aaPredicted RBP3.38□□□□□ -1.87
RPC40YPR110C TUB1P09733 447 aaKnown RBP3.38□□□□□ -1.87
RPC40YPR110C PCT1P13259 424 aa3.38□□□□□ -1.87
RPC40YPR110C PTC6P25646 442 aa3.38□□□□□ -1.87
RPC40YPR110C APD1P38281 316 aa3.38□□□□□ -1.87
RPC40YPR110C AAD10P47182 288 aa3.38□□□□□ -1.87
RPC40YPR110C PIL1P53252 339 aaKnown RBP3.38□□□□□ -1.87
RPC40YPR110C DCP2P53550 970 aaKnown RBP3.38□□□□□ -1.87
RPC40YPR110C BSC5P53755 489 aa3.38□□□□□ -1.87
RPC40YPR110C INN1P53901 409 aa3.38□□□□□ -1.87
RPC40YPR110C ADE16P54113 591 aaKnown RBP3.38□□□□□ -1.87
RPC40YPR110C MUB1Q03162 620 aa3.38□□□□□ -1.87
RPC40YPR110C YDR109CQ04585 715 aa3.38□□□□□ -1.87
RPC40YPR110C LEA1Q08963 238 aaPredicted RBP3.38□□□□□ -1.87
RPC40YPR110C LYS21Q12122 440 aaKnown RBP3.38□□□□□ -1.87
RPC40YPR110C RDL1Q12305 139 aaKnown RBP3.38□□□□□ -1.87
RPC40YPR110C MED1Q12321 566 aa3.38□□□□□ -1.87
RPC40YPR110C RTP1Q12751 981 aa3.38□□□□□ -1.87
RPC40YPR110C SAN1P22470 610 aa3.37□□□□□ -1.87
RPC40YPR110C RPN12P32496 274 aa3.37□□□□□ -1.87
RPC40YPR110C ESL2P36168 1195 aa3.37□□□□□ -1.87
RPC40YPR110C AAP1P37898 856 aaKnown RBP3.37□□□□□ -1.87
RPC40YPR110C SEC31P38968 1273 aaKnown RBP3.37□□□□□ -1.87
RPC40YPR110C ERP2P39704 215 aa3.37□□□□□ -1.87
RPC40YPR110C YEL068CP39977 110 aa3.37□□□□□ -1.87
RPC40YPR110C SLZ1P40167 298 aa3.37□□□□□ -1.87
RPC40YPR110C PFK26P40433 827 aaKnown RBP3.37□□□□□ -1.87
RPC40YPR110C IME4P41833 600 aa3.37□□□□□ -1.87
RPC40YPR110C YJL043WP47053 257 aa3.37□□□□□ -1.87
RPC40YPR110C AAT1Q01802 451 aa3.37□□□□□ -1.87
RPC40YPR110C INA17Q02888 182 aa3.37□□□□□ -1.87
RPC40YPR110C CRN1Q06440 651 aa3.37□□□□□ -1.87
RPC40YPR110C SKM1Q12469 655 aa3.37□□□□□ -1.87
RPC40YPR110C SEC3P33332 1336 aaKnown RBP3.37□□□□□ -1.87
RPC40YPR110C RTC1Q08281 1341 aa3.37□□□□□ -1.87
RPC40YPR110C CDC24P11433 854 aaPredicted RBP3.36□□□□□ -1.87
RPC40YPR110C CDC15P27636 974 aa3.36□□□□□ -1.87
RPC40YPR110C GSH1P32477 678 aa3.36□□□□□ -1.87
RPC40YPR110C PPZ2P33329 710 aa3.36□□□□□ -1.87
RPC40YPR110C NTR2P36118 322 aaPredicted RBP3.36□□□□□ -1.87
RPC40YPR110C FLO10P36170 1169 aa3.36□□□□□ -1.87
RPC40YPR110C RIX1P38883 763 aaPredicted RBP3.36□□□□□ -1.87
RPC40YPR110C ASG1P40467 964 aa3.36□□□□□ -1.87
RPC40YPR110C SWP82P43554 623 aa3.36□□□□□ -1.87
RPC40YPR110C FMP30Q02883 468 aa3.36□□□□□ -1.87
RPC40YPR110C BSP1Q06604 576 aa3.36□□□□□ -1.87
RPC40YPR110C SWA2Q06677 668 aa3.36□□□□□ -1.87
RPC40YPR110C BNR1P40450 1375 aa3.36□□□□□ -1.87
RPC40YPR110C ILV2P07342 687 aaKnown RBP3.35□□□□□ -1.87
RPC40YPR110C AAC3P18238 307 aa3.35□□□□□ -1.87
RPC40YPR110C SAC6P32599 642 aaKnown RBP3.35□□□□□ -1.87
RPC40YPR110C HOT13P36078 116 aa3.35□□□□□ -1.87
RPC40YPR110C ALY1P36117 915 aa3.35□□□□□ -1.87
RPC40YPR110C NOP4P37838 685 aaKnown RBP3.35□□□□□ -1.87
RPC40YPR110C FTH1P38310 465 aa3.35□□□□□ -1.87
RPC40YPR110C IMD2P38697 523 aaKnown RBP3.35□□□□□ -1.87
RPC40YPR110C CDC1P40986 491 aa3.35□□□□□ -1.87
RPC40YPR110C TAX4P47030 604 aa3.35□□□□□ -1.87
RPC40YPR110C IMD3P50095 523 aaKnown RBP3.35□□□□□ -1.87
RPC40YPR110C YSA1Q01976 231 aa3.35□□□□□ -1.87
RPC40YPR110C SDH5Q08230 162 aa3.35□□□□□ -1.87
RPC40YPR110C OSW1Q08692 278 aa3.35□□□□□ -1.87
RPC40YPR110C ENT1Q12518 454 aa3.35□□□□□ -1.87
RPC40YPR110C YOR019WQ99248 730 aa3.35□□□□□ -1.87
RPC40YPR110C TAD3Q9URQ3 322 aa3.35□□□□□ -1.87
RPC40YPR110C MON2P48563 1636 aaPredicted RBP3.34□□□□□ -1.87
RPC40YPR110C YBR085C-AO43137 85 aa3.34□□□□□ -1.87
RPC40YPR110C BI2P03873 423 aa3.34□□□□□ -1.87
RPC40YPR110C YNG2P38806 282 aaKnown RBP3.34□□□□□ -1.87
RPC40YPR110C MRX1P40050 688 aa3.34□□□□□ -1.87
RPC40YPR110C SEC24P40482 926 aaKnown RBP3.34□□□□□ -1.87
RPC40YPR110C LYS14P40971 790 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 111.1 ms