RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	SNU56	Q03782	492 aa	Known RBP	4.28	□□□□□ -1.72
RET3	YPL010W	SEG1	Q04279	960 aa		4.28	□□□□□ -1.72
RET3	YPL010W	PRM6	Q04705	352 aa		4.28	□□□□□ -1.72
RET3	YPL010W	BSP1	Q06604	576 aa		4.28	□□□□□ -1.72
RET3	YPL010W	YCG1	Q06680	1035 aa		4.28	□□□□□ -1.72
RET3	YPL010W	REH1	Q06709	432 aa		4.28	□□□□□ -1.72
RET3	YPL010W	BEM2	P39960	2167 aa	Known RBP	4.28	□□□□□ -1.72
RET3	YPL010W	RIF1	P29539	1916 aa		4.27	□□□□□ -1.73
RET3	YPL010W	TPK1	P06244	397 aa		4.27	□□□□□ -1.73
RET3	YPL010W	RNR2	P09938	399 aa	Known RBP	4.27	□□□□□ -1.73
RET3	YPL010W	TCD2	P36101	447 aa	Known RBP	4.27	□□□□□ -1.73
RET3	YPL010W	YKL023W	P36103	277 aa	Known RBP	4.27	□□□□□ -1.73
RET3	YPL010W	YKR051W	P36142	418 aa		4.27	□□□□□ -1.73
RET3	YPL010W	DOT6	P40059	670 aa	Known RBP	4.27	□□□□□ -1.73
RET3	YPL010W	KAP123	P40069	1113 aa	Known RBP	4.27	□□□□□ -1.73
RET3	YPL010W	OSW5	P40219	148 aa		4.27	□□□□□ -1.73
RET3	YPL010W	PFA3	P42836	336 aa		4.27	□□□□□ -1.73
RET3	YPL010W	SMC3	P47037	1230 aa		4.27	□□□□□ -1.73
RET3	YPL010W	TAD1	P53065	400 aa		4.27	□□□□□ -1.73
RET3	YPL010W	GPR1	Q12361	961 aa		4.27	□□□□□ -1.73
RET3	YPL010W	YLR422W	Q06409	1932 aa		4.27	□□□□□ -1.73
RET3	YPL010W	RPL19A	P0CX82	189 aa	Known RBP	4.26	□□□□□ -1.73
RET3	YPL010W	RPL19B	P0CX83	189 aa	Predicted RBP	4.26	□□□□□ -1.73
RET3	YPL010W	GFA1	P14742	717 aa	Known RBP	4.26	□□□□□ -1.73
RET3	YPL010W	KIN3	P22209	435 aa		4.26	□□□□□ -1.73
RET3	YPL010W	ILV6	P25605	309 aa	Known RBP	4.26	□□□□□ -1.73
RET3	YPL010W	MUD1	P32605	298 aa	Known RBP	4.26	□□□□□ -1.73
RET3	YPL010W	SAK1	P38990	1142 aa		4.26	□□□□□ -1.73
RET3	YPL010W	CTF18	P49956	741 aa		4.26	□□□□□ -1.73
RET3	YPL010W	MTD1	Q02046	320 aa	Known RBP	4.26	□□□□□ -1.73
RET3	YPL010W	ATP25	Q03153	612 aa		4.26	□□□□□ -1.73
RET3	YPL010W	LRS4	Q04087	347 aa	Known RBP	4.26	□□□□□ -1.73
RET3	YPL010W	RSC3	Q06639	885 aa		4.26	□□□□□ -1.73
RET3	YPL010W	TSR1	Q07381	788 aa	Known RBP	4.26	□□□□□ -1.73
RET3	YPL010W	YPR027C	Q12079	277 aa		4.26	□□□□□ -1.73
RET3	YPL010W	CCH1	P50077	2039 aa		4.26	□□□□□ -1.73
RET3	YPL010W	HIS4	P00815	799 aa	Known RBP	4.25	□□□□□ -1.73
RET3	YPL010W	CHS1	P08004	1131 aa		4.25	□□□□□ -1.73
RET3	YPL010W	FRE1	P32791	686 aa		4.25	□□□□□ -1.73
RET3	YPL010W	YBR056W	P38081	501 aa		4.25	□□□□□ -1.73
RET3	YPL010W	AGP2	P38090	596 aa		4.25	□□□□□ -1.73
RET3	YPL010W	SIF2	P38262	535 aa		4.25	□□□□□ -1.73
RET3	YPL010W	YBR259W	P38338	688 aa		4.25	□□□□□ -1.73
RET3	YPL010W	YHR020W	P38708	688 aa	Known RBP	4.25	□□□□□ -1.73
RET3	YPL010W	GDH3	P39708	457 aa		4.25	□□□□□ -1.73
RET3	YPL010W	ECM1	P39715	212 aa		4.25	□□□□□ -1.73
RET3	YPL010W	BAP3	P41815	604 aa		4.25	□□□□□ -1.73
RET3	YPL010W	HSV2	P50079	448 aa	Predicted RBP	4.25	□□□□□ -1.73
RET3	YPL010W	NUP84	P52891	726 aa		4.25	□□□□□ -1.73
RET3	YPL010W	CRR1	Q05790	422 aa		4.25	□□□□□ -1.73
RET3	YPL010W	YBR182C-A	Q8TGU6	64 aa		4.25	□□□□□ -1.73
RET3	YPL010W	YCL002C	P25565	263 aa		4.24	□□□□□ -1.73
RET3	YPL010W	TFB1	P32776	642 aa		4.24	□□□□□ -1.73
RET3	YPL010W	SWE1	P32944	819 aa		4.24	□□□□□ -1.73
RET3	YPL010W	YBR225W	P38321	900 aa		4.24	□□□□□ -1.73
RET3	YPL010W	TIF5	P38431	405 aa	Known RBP	4.24	□□□□□ -1.73
RET3	YPL010W	SET5	P38890	526 aa	Known RBP	4.24	□□□□□ -1.73
RET3	YPL010W	AVT2	P39981	480 aa		4.24	□□□□□ -1.73
RET3	YPL010W	FMP52	P40008	231 aa		4.24	□□□□□ -1.73
RET3	YPL010W	HOS4	P40480	1083 aa		4.24	□□□□□ -1.73
RET3	YPL010W	RSM25	P40496	264 aa		4.24	□□□□□ -1.73
RET3	YPL010W	RMD8	P43620	662 aa		4.24	□□□□□ -1.73
RET3	YPL010W	YJR054W	P47114	497 aa		4.24	□□□□□ -1.73
RET3	YPL010W	VPS73	P53142	486 aa	Known RBP	4.24	□□□□□ -1.73
RET3	YPL010W	MUB1	Q03162	620 aa		4.24	□□□□□ -1.73
RET3	YPL010W	DON1	Q05610	365 aa		4.24	□□□□□ -1.73
RET3	YPL010W	IRC13	Q08630	104 aa		4.24	□□□□□ -1.73
RET3	YPL010W	TGL5	Q12043	749 aa		4.24	□□□□□ -1.73
RET3	YPL010W	YPL150W	Q12152	901 aa		4.24	□□□□□ -1.73
RET3	YPL010W	MED1	Q12321	566 aa		4.24	□□□□□ -1.73
RET3	YPL010W	REV1	P12689	985 aa		4.23	□□□□□ -1.73
RET3	YPL010W	CDC43	P18898	376 aa		4.23	□□□□□ -1.73
RET3	YPL010W	EFB1	P32471	206 aa	Known RBP	4.23	□□□□□ -1.73
RET3	YPL010W	SWI3	P32591	825 aa		4.23	□□□□□ -1.73
RET3	YPL010W	YEL1	P34225	687 aa		4.23	□□□□□ -1.73
RET3	YPL010W	PCL5	P38794	229 aa		4.23	□□□□□ -1.73
RET3	YPL010W	DSE1	P40077	573 aa		4.23	□□□□□ -1.73
RET3	YPL010W	YJR061W	P40355	935 aa		4.23	□□□□□ -1.73
RET3	YPL010W	ERG10	P41338	398 aa	Known RBP	4.23	□□□□□ -1.73
RET3	YPL010W	TAH11	P47112	604 aa		4.23	□□□□□ -1.73
RET3	YPL010W	HXT16	P47185	567 aa		4.23	□□□□□ -1.73
RET3	YPL010W	RPA49	Q01080	415 aa	Predicted RBP	4.23	□□□□□ -1.73
RET3	YPL010W	YPL014W	Q02606	381 aa		4.23	□□□□□ -1.73
RET3	YPL010W	SMA1	Q02651	245 aa		4.23	□□□□□ -1.73
RET3	YPL010W	YDR514C	Q04408	483 aa		4.23	□□□□□ -1.73
RET3	YPL010W	COG8	Q04632	607 aa		4.23	□□□□□ -1.73
RET3	YPL010W	ECM22	Q05958	814 aa	Predicted RBP	4.23	□□□□□ -1.73
RET3	YPL010W	RLP24	Q07915	199 aa	Known RBP	4.23	□□□□□ -1.73
RET3	YPL010W	MLH2	Q07980	695 aa		4.23	□□□□□ -1.73
RET3	YPL010W	APC5	Q08683	685 aa		4.23	□□□□□ -1.73
RET3	YPL010W	GIS3	Q12418	502 aa		4.23	□□□□□ -1.73
RET3	YPL010W	GCN1	P33892	2672 aa	Known RBP	4.22	□□□□□ -1.73
RET3	YPL010W	MSF1	P08425	469 aa		4.22	□□□□□ -1.73
RET3	YPL010W	RNR1	P21524	888 aa	Known RBP	4.22	□□□□□ -1.73
RET3	YPL010W	LRE1	P25579	583 aa	Known RBP	4.22	□□□□□ -1.73
RET3	YPL010W	CCR4	P31384	837 aa	Known RBP	4.22	□□□□□ -1.73
RET3	YPL010W	PDR3	P33200	976 aa		4.22	□□□□□ -1.73
RET3	YPL010W	BET3	P36149	193 aa		4.22	□□□□□ -1.73
RET3	YPL010W	MAL33	P38157	468 aa		4.22	□□□□□ -1.73
RET3	YPL010W	BCD1	P38772	366 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms