RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C PDR18P53756 1333 aa3.87□□□□□ -1.79
RPA43YOR340C CDC16P09798 840 aa3.86□□□□□ -1.79
RPA43YOR340C SIR1P21691 654 aa3.86□□□□□ -1.79
RPA43YOR340C PSY4P38193 441 aa3.86□□□□□ -1.79
RPA43YOR340C PUG1P40100 303 aa3.86□□□□□ -1.79
RPA43YOR340C ACS1Q01574 713 aa3.86□□□□□ -1.79
RPA43YOR340C AAD4Q07747 329 aa3.86□□□□□ -1.79
RPA43YOR340C ECM29P38737 1868 aa3.86□□□□□ -1.79
RPA43YOR340C CYB2P00175 591 aa3.85□□□□□ -1.79
RPA43YOR340C CHO2P05374 869 aaKnown RBP3.85□□□□□ -1.79
RPA43YOR340C POL3P15436 1097 aa3.85□□□□□ -1.79
RPA43YOR340C NCP1P16603 691 aaKnown RBP3.85□□□□□ -1.79
RPA43YOR340C COQ1P18900 473 aa3.85□□□□□ -1.79
RPA43YOR340C MCM3P24279 971 aaKnown RBP3.85□□□□□ -1.79
RPA43YOR340C SWI4P25302 1093 aaKnown RBP3.85□□□□□ -1.79
RPA43YOR340C YCL049CP25577 312 aa3.85□□□□□ -1.79
RPA43YOR340C YBL028CP38202 106 aa3.85□□□□□ -1.79
RPA43YOR340C YBR138CP38277 524 aa3.85□□□□□ -1.79
RPA43YOR340C UBS1P38290 277 aa3.85□□□□□ -1.79
RPA43YOR340C RFC1P38630 861 aaKnown RBP3.85□□□□□ -1.79
RPA43YOR340C PPE1P38796 400 aa3.85□□□□□ -1.79
RPA43YOR340C YEL025CP39991 1188 aa3.85□□□□□ -1.79
RPA43YOR340C PMT6P42934 759 aa3.85□□□□□ -1.79
RPA43YOR340C YGR054WP53235 642 aaKnown RBP3.85□□□□□ -1.79
RPA43YOR340C NKP2Q06162 153 aa3.85□□□□□ -1.79
RPA43YOR340C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
RPA43YOR340C MYO1P08964 1928 aa3.85□□□□□ -1.79
RPA43YOR340C TUF1P02992 437 aaKnown RBP3.84□□□□□ -1.79
RPA43YOR340C MIS1P09440 975 aaKnown RBP3.84□□□□□ -1.79
RPA43YOR340C PCK1P10963 549 aa3.84□□□□□ -1.79
RPA43YOR340C KRS1P15180 591 aaKnown RBP3.84□□□□□ -1.79
RPA43YOR340C SPO11P23179 398 aa3.84□□□□□ -1.79
RPA43YOR340C RIT1P23796 513 aa3.84□□□□□ -1.79
RPA43YOR340C DHR2P36009 735 aaPredicted RBP3.84□□□□□ -1.79
RPA43YOR340C ATF1P40353 525 aa3.84□□□□□ -1.79
RPA43YOR340C YIL166CP40445 542 aa3.84□□□□□ -1.79
RPA43YOR340C THI6P41835 540 aa3.84□□□□□ -1.79
RPA43YOR340C IRC8P47046 822 aa3.84□□□□□ -1.79
RPA43YOR340C RRT6P53117 311 aaPredicted RBP3.84□□□□□ -1.79
RPA43YOR340C SNF12P53628 566 aa3.84□□□□□ -1.79
RPA43YOR340C DAK1P54838 584 aaKnown RBP3.84□□□□□ -1.79
RPA43YOR340C MFM1Q02783 413 aa3.84□□□□□ -1.79
RPA43YOR340C NGL2Q03264 515 aaKnown RBP3.84□□□□□ -1.79
RPA43YOR340C TRS31Q03337 283 aa3.84□□□□□ -1.79
RPA43YOR340C ENT2Q05785 613 aa3.84□□□□□ -1.79
RPA43YOR340C IWR1Q07532 353 aaPredicted RBP3.84□□□□□ -1.79
RPA43YOR340C CRD1Q07560 283 aa3.84□□□□□ -1.79
RPA43YOR340C PCL8Q08966 492 aa3.84□□□□□ -1.79
RPA43YOR340C NEW1Q08972 1196 aaKnown RBP3.84□□□□□ -1.79
RPA43YOR340C KEL3Q08979 651 aaPredicted RBP3.84□□□□□ -1.79
RPA43YOR340C MDM20Q12387 796 aaKnown RBP3.84□□□□□ -1.79
RPA43YOR340C ADE3P07245 946 aaKnown RBP3.83□□□□□ -1.8
RPA43YOR340C MTF2P10849 440 aa3.83□□□□□ -1.8
RPA43YOR340C SEC12P11655 471 aa3.83□□□□□ -1.8
RPA43YOR340C RPA135P22138 1203 aaKnown RBP3.83□□□□□ -1.8
RPA43YOR340C CLB4P24871 460 aa3.83□□□□□ -1.8
RPA43YOR340C MCM10P32354 571 aa3.83□□□□□ -1.8
RPA43YOR340C XRS2P33301 854 aa3.83□□□□□ -1.8
RPA43YOR340C APE3P37302 537 aaKnown RBP3.83□□□□□ -1.8
RPA43YOR340C STB5P38699 743 aa3.83□□□□□ -1.8
RPA43YOR340C MUP3P38734 546 aa3.83□□□□□ -1.8
RPA43YOR340C LRO1P40345 661 aa3.83□□□□□ -1.8
RPA43YOR340C SMK1P41808 388 aa3.83□□□□□ -1.8
RPA43YOR340C MRPL13Q02204 264 aa3.83□□□□□ -1.8
RPA43YOR340C TRS23Q03784 219 aa3.83□□□□□ -1.8
RPA43YOR340C YDR179W-AQ03983 463 aa3.83□□□□□ -1.8
RPA43YOR340C RIM20Q12033 661 aa3.83□□□□□ -1.8
RPA43YOR340C RPN13O13563 156 aa3.82□□□□□ -1.8
RPA43YOR340C NUC1P08466 329 aa3.82□□□□□ -1.8
RPA43YOR340C STE12P13574 688 aa3.82□□□□□ -1.8
RPA43YOR340C VPS33P20795 691 aa3.82□□□□□ -1.8
RPA43YOR340C UBC1P21734 215 aaKnown RBP3.82□□□□□ -1.8
RPA43YOR340C PRE8P23639 250 aa3.82□□□□□ -1.8
RPA43YOR340C PRO3P32263 286 aaKnown RBP3.82□□□□□ -1.8
RPA43YOR340C MRPL7P36519 292 aa3.82□□□□□ -1.8
RPA43YOR340C AAP1P37898 856 aaKnown RBP3.82□□□□□ -1.8
RPA43YOR340C YJL193WP39542 402 aa3.82□□□□□ -1.8
RPA43YOR340C TIF4631P39935 952 aaKnown RBP3.82□□□□□ -1.8
RPA43YOR340C VFA1P40080 203 aa3.82□□□□□ -1.8
RPA43YOR340C RAD26P40352 1085 aa3.82□□□□□ -1.8
RPA43YOR340C PSF2P40359 213 aa3.82□□□□□ -1.8
RPA43YOR340C POL31P46957 487 aa3.82□□□□□ -1.8
RPA43YOR340C BNA1P47096 177 aa3.82□□□□□ -1.8
RPA43YOR340C APM1Q00776 475 aaPredicted RBP3.82□□□□□ -1.8
RPA43YOR340C EFR3Q03653 782 aaKnown RBP3.82□□□□□ -1.8
RPA43YOR340C ARA2Q04212 335 aa3.82□□□□□ -1.8
RPA43YOR340C YMR018WQ04364 514 aa3.82□□□□□ -1.8
RPA43YOR340C RBA50Q04418 439 aa3.82□□□□□ -1.8
RPA43YOR340C HOF1Q05080 669 aa3.82□□□□□ -1.8
RPA43YOR340C OPY2Q06810 360 aa3.82□□□□□ -1.8
RPA43YOR340C TAH18Q12181 623 aa3.82□□□□□ -1.8
RPA43YOR340C SUT2Q12286 268 aa3.82□□□□□ -1.8
RPA43YOR340C SAM2P19358 384 aaKnown RBP3.81□□□□□ -1.8
RPA43YOR340C CHS3P29465 1165 aa3.81□□□□□ -1.8
RPA43YOR340C DSS4P32601 143 aa3.81□□□□□ -1.8
RPA43YOR340C EMP70P32802 667 aa3.81□□□□□ -1.8
RPA43YOR340C PPZ2P33329 710 aa3.81□□□□□ -1.8
RPA43YOR340C SLC1P33333 303 aa3.81□□□□□ -1.8
RPA43YOR340C IFA38P38286 347 aa3.81□□□□□ -1.8
RPA43YOR340C RTS1P38903 757 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms