RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	PET309	P32522	965 aa	Predicted RBP	3	□□□□□ -1.93
SKP2	YNL311C	KAR9	P32526	644 aa		3	□□□□□ -1.93
SKP2	YNL311C	ABZ1	P37254	787 aa	Predicted RBP	3	□□□□□ -1.93
SKP2	YNL311C	LRP1	P38801	184 aa	Known RBP	3	□□□□□ -1.93
SKP2	YNL311C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
SKP2	YNL311C	LSM4	P40070	187 aa	Known RBP	3	□□□□□ -1.93
SKP2	YNL311C	PEX31	P53203	462 aa		3	□□□□□ -1.93
SKP2	YNL311C	BSC5	P53755	489 aa		3	□□□□□ -1.93
SKP2	YNL311C	IGO1	P53897	168 aa		3	□□□□□ -1.93
SKP2	YNL311C	PPM1	Q04081	328 aa		3	□□□□□ -1.93
SKP2	YNL311C	PSK2	Q08217	1101 aa		3	□□□□□ -1.93
SKP2	YNL311C	CIR2	Q08822	631 aa		3	□□□□□ -1.93
SKP2	YNL311C	NEW1	Q08972	1196 aa	Known RBP	3	□□□□□ -1.93
SKP2	YNL311C	YLR049C	Q12110	428 aa		3	□□□□□ -1.93
SKP2	YNL311C	LEU9	Q12166	604 aa	Known RBP	3	□□□□□ -1.93
SKP2	YNL311C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	RIP-Chip
SKP2	YNL311C	YDL177C	Q12257	170 aa		3	□□□□□ -1.93
SKP2	YNL311C	NSI1	Q12457	570 aa		3	□□□□□ -1.93
SKP2	YNL311C	DYN1	P36022	4092 aa		3	□□□□□ -1.93
SKP2	YNL311C	RPS6A	P0CX37	236 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	RPS6B	P0CX38	236 aa	Predicted RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	TUP1	P16649	713 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	RGP1	P16664	663 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	SFA1	P32771	386 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	MRT4	P33201	236 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	SKN1	P33336	771 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	YHR033W	P38690	423 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	YHL041W	P38730	149 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	PRM9	P39551	298 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	LRO1	P40345	661 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	FIG4	P42837	879 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	KRI1	P42846	591 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	INN1	P53901	409 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	CEF1	Q03654	590 aa	Predicted RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	PRS5	Q12265	496 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	COX17	Q12287	69 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	HIS1	P00498	297 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	HSP82	P02829	709 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	YER152C	P10356	443 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	PMA2	P19657	947 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	PHO84	P25297	587 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	IML3	P38265	245 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	RPH1	P39956	796 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	EDC3	P39998	551 aa	Known RBP	2.99	□□□□□ -1.93
SKP2	YNL311C	YIL086C	P40503	102 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	COS5	P47187	383 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	TPO1	Q07824	586 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	HER1	Q12276	1246 aa		2.99	□□□□□ -1.93
SKP2	YNL311C	COX1	P00401	534 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	ILS1	P09436	1072 aa	Known RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	NAM9	P27929	486 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	KRE6	P32486	720 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	NTR2	P36118	322 aa	Predicted RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	YAT2	P40017	923 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	KTR7	P40504	517 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	PHB1	P40961	287 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	SIP4	P46954	829 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	DFG5	Q05031	458 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	FAR10	Q06001	478 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	THI20	Q08224	551 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	AKR2	Q12013	749 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	TGL5	Q12043	749 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	DIN7	Q12086	430 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	AI5_ALPHA	Q9ZZX1	630 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	LEU1	P07264	779 aa	Known RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	PPR1	P07272	904 aa	Predicted RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	HOP1	P20050	605 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	REC107	P21651	314 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	MKK2	P32491	506 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	DOM34	P33309	386 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	EBP2	P36049	427 aa	Known RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	VHC1	P38329	1120 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	RPT2	P40327	437 aa	Known RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	SNG1	P46950	547 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	INA17	Q02888	182 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	RRP45	Q05636	305 aa	Known RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	YLR297W	Q05899	129 aa		2.98	□□□□□ -1.93
SKP2	YNL311C	PUS7	Q08647	676 aa	Known RBP	2.98	□□□□□ -1.93
SKP2	YNL311C	MDN1	Q12019	4910 aa	Known RBP	2.97	□□□□□ -1.93
SKP2	YNL311C	KAR1	P11927	433 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	UBA1	P22515	1024 aa	Known RBP	2.97	□□□□□ -1.93
SKP2	YNL311C	TRK2	P28584	889 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	PXL1	P36166	706 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	MAL32	P38158	584 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	YHL008C	P38750	627 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	YHR210C	P38893	341 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	AXL2	P38928	823 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	LYS1	P38998	373 aa	RIP-Chip data	2.97	□□□□□ -1.93	not detected
SKP2	YNL311C	SAP1	P39955	897 aa	Known RBP	2.97	□□□□□ -1.93
SKP2	YNL311C	GIP2	P40036	548 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	GTS1	P40956	396 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	PMT4	P46971	762 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	CSN12	P47130	423 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	YGR012W	P53206	393 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	TRM8	Q12009	286 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	YDL176W	Q12027	708 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	MCD1	Q12158	566 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	LAG2	Q92325	660 aa		2.97	□□□□□ -1.93
SKP2	YNL311C	SCH9	P11792	824 aa	Known RBP	2.96	□□□□□ -1.93
SKP2	YNL311C	MSH1	P25846	959 aa		2.96	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms