RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W PSF2P40359 213 aa2.82□□□□□ -1.96
PEP8YJL053W MRPL13Q02204 264 aa2.82□□□□□ -1.96
PEP8YJL053W UBP16Q02863 499 aa2.82□□□□□ -1.96
PEP8YJL053W PLM2Q04383 521 aa2.82□□□□□ -1.96
PEP8YJL053W YDL242WQ07746 117 aa2.82□□□□□ -1.96
PEP8YJL053W YMR230W-AQ3E7B5 62 aa2.82□□□□□ -1.96
PEP8YJL053W SSM4P40318 1319 aa2.82□□□□□ -1.96
PEP8YJL053W NUC1P08466 329 aa2.81□□□□□ -1.96
PEP8YJL053W BIK1P11709 440 aa2.81□□□□□ -1.96
PEP8YJL053W SWI4P25302 1093 aaKnown RBP2.81□□□□□ -1.96
PEP8YJL053W YCL049CP25577 312 aa2.81□□□□□ -1.96
PEP8YJL053W YJU2P28320 278 aaPredicted RBP2.81□□□□□ -1.96
PEP8YJL053W DBF20P32328 564 aa2.81□□□□□ -1.96
PEP8YJL053W ARP2P32381 391 aaKnown RBP2.81□□□□□ -1.96
PEP8YJL053W XRS2P33301 854 aa2.81□□□□□ -1.96
PEP8YJL053W ARO9P38840 513 aaPredicted RBP2.81□□□□□ -1.96
PEP8YJL053W SMK1P41808 388 aa2.81□□□□□ -1.96
PEP8YJL053W ZAP1P47043 880 aa2.81□□□□□ -1.96
PEP8YJL053W UBX6P47049 396 aa2.81□□□□□ -1.96
PEP8YJL053W MTG1Q03151 367 aaPredicted RBP2.81□□□□□ -1.96
PEP8YJL053W YML119WQ03208 357 aa2.81□□□□□ -1.96
PEP8YJL053W FCP1Q03254 732 aa2.81□□□□□ -1.96
PEP8YJL053W MLH2Q07980 695 aa2.81□□□□□ -1.96
PEP8YJL053W YPL191CQ08930 360 aa2.81□□□□□ -1.96
PEP8YJL053W ICL2Q12031 575 aa2.81□□□□□ -1.96
PEP8YJL053W LCB4Q12246 624 aa2.81□□□□□ -1.96
PEP8YJL053W RVB2Q12464 471 aaKnown RBP2.81□□□□□ -1.96
PEP8YJL053W CET1O13297 549 aaPredicted RBP2.8□□□□□ -1.96
PEP8YJL053W APA1P16550 321 aaKnown RBP2.8□□□□□ -1.96
PEP8YJL053W PFK2P16862 959 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
PEP8YJL053W AMD2P22580 549 aa2.8□□□□□ -1.96
PEP8YJL053W FUI1P38196 639 aa2.8□□□□□ -1.96
PEP8YJL053W UME6P39001 836 aa2.8□□□□□ -1.96
PEP8YJL053W YIL161WP40449 235 aaKnown RBP2.8□□□□□ -1.96
PEP8YJL053W IML2P47031 731 aa2.8□□□□□ -1.96
PEP8YJL053W HOS2P53096 452 aaPredicted RBP2.8□□□□□ -1.96
PEP8YJL053W YGR021WP53212 290 aa2.8□□□□□ -1.96
PEP8YJL053W RAD33Q04231 177 aa2.8□□□□□ -1.96
PEP8YJL053W GTB1Q04924 702 aa2.8□□□□□ -1.96
PEP8YJL053W YML053CQ04978 212 aa2.8□□□□□ -1.96
PEP8YJL053W ATG23Q06671 453 aa2.8□□□□□ -1.96
PEP8YJL053W CSR1Q06705 408 aaKnown RBP2.8□□□□□ -1.96
PEP8YJL053W Q0010Q9ZZX9 128 aa2.8□□□□□ -1.96
PEP8YJL053W TPK1P06244 397 aa2.79□□□□□ -1.96
PEP8YJL053W ILV2P07342 687 aaKnown RBP2.79□□□□□ -1.96
PEP8YJL053W MTF2P10849 440 aa2.79□□□□□ -1.96
PEP8YJL053W PRP16P15938 1071 aaPredicted RBP2.79□□□□□ -1.96
PEP8YJL053W SPO16P17122 198 aa2.79□□□□□ -1.96
PEP8YJL053W PSY4P38193 441 aa2.79□□□□□ -1.96
PEP8YJL053W YBR138CP38277 524 aa2.79□□□□□ -1.96
PEP8YJL053W VBA2P38358 474 aaKnown RBP2.79□□□□□ -1.96
PEP8YJL053W TOM71P38825 639 aaKnown RBP2.79□□□□□ -1.96
PEP8YJL053W VPS8P39702 1274 aa2.79□□□□□ -1.96
PEP8YJL053W SAP1P39955 897 aaKnown RBP2.79□□□□□ -1.96
PEP8YJL053W IES5P40060 125 aa2.79□□□□□ -1.96
PEP8YJL053W RPT2P40327 437 aaKnown RBP2.79□□□□□ -1.96
PEP8YJL053W ERR3P42222 437 aa2.79□□□□□ -1.96
PEP8YJL053W YGR079WP53249 370 aa2.79□□□□□ -1.96
PEP8YJL053W ARC35P53731 342 aaKnown RBP2.79□□□□□ -1.96
PEP8YJL053W VTC3Q02725 835 aa2.79□□□□□ -1.96
PEP8YJL053W YOR389WQ08912 624 aa2.79□□□□□ -1.96
PEP8YJL053W SUL2Q12325 893 aa2.79□□□□□ -1.96
PEP8YJL053W NCP1P16603 691 aaKnown RBP2.78□□□□□ -1.96
PEP8YJL053W UBC1P21734 215 aaKnown RBP2.78□□□□□ -1.96
PEP8YJL053W RRP43P25359 394 aaPredicted RBP2.78□□□□□ -1.96
PEP8YJL053W URK1P27515 501 aa2.78□□□□□ -1.96
PEP8YJL053W LAC1P28496 418 aa2.78□□□□□ -1.96
PEP8YJL053W KES1P35844 434 aaKnown RBP2.78□□□□□ -1.96
PEP8YJL053W TEF4P36008 412 aaKnown RBP2.78□□□□□ -1.96
PEP8YJL053W ERC1P38767 581 aa2.78□□□□□ -1.96
PEP8YJL053W KAP123P40069 1113 aaKnown RBP2.78□□□□□ -1.96
PEP8YJL053W DJP1P40564 432 aa2.78□□□□□ -1.96
PEP8YJL053W ASE1P50275 885 aa2.78□□□□□ -1.96
PEP8YJL053W YRB30P53107 440 aaPredicted RBP2.78□□□□□ -1.96
PEP8YJL053W TAM41P53230 385 aa2.78□□□□□ -1.96
PEP8YJL053W GTR1Q00582 310 aa2.78□□□□□ -1.96
PEP8YJL053W ECM16Q04217 1267 aaKnown RBP2.78□□□□□ -1.96
PEP8YJL053W SWT1Q12104 458 aa2.78□□□□□ -1.96
PEP8YJL053W BAG7Q12128 409 aa2.78□□□□□ -1.96
PEP8YJL053W TIP41Q12199 356 aa2.78□□□□□ -1.96
PEP8YJL053W ATP2P00830 511 aaKnown RBP2.77□□□□□ -1.97
PEP8YJL053W TRX2P22803 104 aaKnown RBP2.77□□□□□ -1.97
PEP8YJL053W LRE1P25579 583 aaKnown RBP2.77□□□□□ -1.97
PEP8YJL053W CNS1P33313 385 aa2.77□□□□□ -1.97
PEP8YJL053W FTH1P38310 465 aa2.77□□□□□ -1.97
PEP8YJL053W IMD2P38697 523 aaKnown RBP2.77□□□□□ -1.97
PEP8YJL053W IST3P40565 148 aaPredicted RBP2.77□□□□□ -1.97
PEP8YJL053W NPA3P47122 385 aa2.77□□□□□ -1.97
PEP8YJL053W CTF18P49956 741 aa2.77□□□□□ -1.97
PEP8YJL053W IMD3P50095 523 aaKnown RBP2.77□□□□□ -1.97
PEP8YJL053W YAT1P80235 687 aa2.77□□□□□ -1.97
PEP8YJL053W CIA1Q05583 330 aa2.77□□□□□ -1.97
PEP8YJL053W VAM6Q07468 1049 aa2.77□□□□□ -1.97
PEP8YJL053W COX17Q12287 69 aa2.77□□□□□ -1.97
PEP8YJL053W RTC1Q08281 1341 aa2.76□□□□□ -1.97
PEP8YJL053W GAL4P04386 881 aa2.76□□□□□ -1.97
PEP8YJL053W SES1P07284 462 aaKnown RBP2.76□□□□□ -1.97
PEP8YJL053W CDC15P27636 974 aa2.76□□□□□ -1.97
PEP8YJL053W MSS51P32335 436 aa2.76□□□□□ -1.97
PEP8YJL053W SLC1P33333 303 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms