RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GNAT2P19087 354 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 CASP14P31944 242 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 PLCD1P51178 756 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 PTGDRQ13258 359 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 RRAGBQ5VZM2 374 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 TMTC2Q8N394 836 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 CCDC175P0C221 793 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 VEGFAP15692 232 aaPredicted RBP16.59■□□□□ 0.25
SCARB2-221ENST00000640341 NLRP5P59047 1200 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 ZNF569Q5MCW4 686 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 ZNF34Q8IZ26 560 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 PAGE5Q96GU1 130 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 N4BP3O15049 544 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 ZNF18P17022 549 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 CRKLP46109 303 aaKnown RBP16.59■□□□□ 0.25
SCARB2-221ENST00000640341 KCNJ6P48051 423 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 KIF4BQ2VIQ3 1234 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 ZSCAN10Q96SZ4 725 aaPredicted RBP16.59■□□□□ 0.25
SCARB2-221ENST00000640341 BRMS1Q9HCU9 246 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 AATFQ9NY61 560 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCARB2-221ENST00000640341 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
SCARB2-221ENST00000640341 ZNF142P52746 1687 aaPredicted RBP16.59■□□□□ 0.25
SCARB2-221ENST00000640341 FAM237AA0A1B0GTK4 181 aa16.58■□□□□ 0.25
SCARB2-221ENST00000640341 EFCAB8A8MWE9 144 aa16.58■□□□□ 0.25
SCARB2-221ENST00000640341 IL6STP40189 918 aaPredicted RBP16.58■□□□□ 0.25
SCARB2-221ENST00000640341 ACRBPQ8NEB7 543 aa16.58■□□□□ 0.25
SCARB2-221ENST00000640341 PKD1L3Q7Z443 1732 aa16.58■□□□□ 0.25
SCARB2-221ENST00000640341 PLA2G4AP47712 749 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 FILIP1LQ4L180 1135 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 NUP188Q5SRE5 1749 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 RAD9BQ6WBX8 426 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 NUP88Q99567 741 aaPredicted RBP16.58■□□□□ 0.24
SCARB2-221ENST00000640341 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 KANK3Q6NY19 840 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 RASGRP4Q8TDF6 673 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 TAB2Q9NYJ8 693 aa16.58■□□□□ 0.24
SCARB2-221ENST00000640341 TTC38Q5R3I4 469 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 ADAMTSL3P82987 1691 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 SARSP49591 514 aaKnown RBP16.57■□□□□ 0.24
SCARB2-221ENST00000640341 MCM6Q14566 821 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 NEK11Q8NG66 645 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
SCARB2-221ENST00000640341 PARD6BQ9BYG5 372 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 ZBTB22O15209 634 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 ABL1P00519 1130 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 RHOXF2BP0C7M4 288 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-221ENST00000640341 NR1I3Q14994 352 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 PKN1Q16512 942 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 CTCFLQ8NI51 663 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-221ENST00000640341 RHOXF2Q9BQY4 288 aa16.57■□□□□ 0.24
SCARB2-221ENST00000640341 SRRTQ9BXP5 876 aaKnown RBP16.57■□□□□ 0.24
SCARB2-221ENST00000640341 KIF5CO60282 957 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 GPIHBP1Q8IV16 184 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 CCDC87Q9NVE4 849 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 SPEF2Q9C093 1822 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 AKAP11Q9UKA4 1901 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 ADAMTS3O15072 1205 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 CYP2D6P10635 497 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 DPYDQ12882 1025 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 SPATA1Q5VX52 437 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 GPKOWQ92917 476 aaPredicted RBP eCLIP16.56■□□□□ 0.24
SCARB2-221ENST00000640341 RNF26Q9BY78 433 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-221ENST00000640341 ATRNO75882 1429 aa16.56■□□□□ 0.24
SCARB2-221ENST00000640341 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 SASH3O75995 380 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 TUBB4AP04350 444 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCARB2-221ENST00000640341 CAVIN4Q5BKX8 364 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 ARFGAP3Q9NP61 516 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 GNL3LQ9NVN8 582 aaKnown RBP16.55■□□□□ 0.24
SCARB2-221ENST00000640341 GOLGB1Q14789 3259 aaKnown RBP16.55■□□□□ 0.24
SCARB2-221ENST00000640341 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 TPM1P09493 284 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 KLRK1P26718 216 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 CUL4BQ13620 913 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-221ENST00000640341 MRFAP1Q9Y605 127 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 ANKRD18AQ8IVF6 992 aa16.55■□□□□ 0.24
SCARB2-221ENST00000640341 GOLGA6L9A6NEM1 432 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 OAS2P29728 719 aaKnown RBP16.54■□□□□ 0.24
SCARB2-221ENST00000640341 SEC23AQ15436 765 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 WWC2Q6AWC2 1192 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 A0A1B0GTH6 734 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 GDAQ9Y2T3 454 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
SCARB2-221ENST00000640341 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 FCHSD1Q86WN1 690 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 SRBD1Q8N5C6 995 aaKnown RBP16.54■□□□□ 0.24
SCARB2-221ENST00000640341 TRIML1Q8N9V2 468 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
SCARB2-221ENST00000640341 GOLGA1Q92805 767 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 TFR2Q9UP52 801 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 ADGRG1Q9Y653 693 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 PNPLA7Q6ZV29 1317 aa16.54■□□□□ 0.24
SCARB2-221ENST00000640341 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms