RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 USP17L17D6RBQ6 530 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 USP17L19D6RCP7 530 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 USP17L20D6RJB6 530 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 HLA-DOAP06340 250 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 PTPREP23469 700 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 CYP2C19P33261 490 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 CCNA1P78396 465 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 ATP2B2Q01814 1243 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 USP17L24Q0WX57 530 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.46
TMCO3-209ENST00000619336 TTC39AQ5SRH9 613 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 NPLOC4Q8TAT6 608 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 LPAR1Q92633 364 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 CDX2Q99626 313 aaPredicted RBP17.9■□□□□ 0.46
TMCO3-209ENST00000619336 ATP11BQ9Y2G3 1177 aa17.9■□□□□ 0.46
TMCO3-209ENST00000619336 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
TMCO3-209ENST00000619336 SLC15A5A6NIM6 579 aa17.89■□□□□ 0.45
TMCO3-209ENST00000619336 DNM1LO00429 736 aa17.89■□□□□ 0.45
TMCO3-209ENST00000619336 CYP2E1P05181 493 aaPredicted RBP17.89■□□□□ 0.45
TMCO3-209ENST00000619336 DYNLL1P63167 89 aaKnown RBP17.89■□□□□ 0.45
TMCO3-209ENST00000619336 TRMT2AQ8IZ69 625 aaKnown RBP17.89■□□□□ 0.45
TMCO3-209ENST00000619336 TRPV1Q8NER1 839 aa17.89■□□□□ 0.45
TMCO3-209ENST00000619336 C12orf42Q96LP6 360 aa17.89■□□□□ 0.45
TMCO3-209ENST00000619336 BTBD7Q9P203 1132 aa17.89■□□□□ 0.45
TMCO3-209ENST00000619336 MSCO60682 206 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 GRB14Q14449 540 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 SHHQ15465 462 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 C9orf50Q5SZB4 431 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 GJC2Q5T442 439 aaPredicted RBP17.88■□□□□ 0.45
TMCO3-209ENST00000619336 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 CATSPERGQ6ZRH7 1159 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 MAFAQ8NHW3 353 aaPredicted RBP17.88■□□□□ 0.45
TMCO3-209ENST00000619336 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 IVNS1ABPQ9Y6Y0 642 aa17.88■□□□□ 0.45
TMCO3-209ENST00000619336 CDH23Q9H251 3354 aa17.87■□□□□ 0.45
TMCO3-209ENST00000619336 HOXC6P09630 235 aa17.87■□□□□ 0.45
TMCO3-209ENST00000619336 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
TMCO3-209ENST00000619336 VCAM1P19320 739 aa17.87■□□□□ 0.45
TMCO3-209ENST00000619336 RAB3GAP1Q15042 981 aa17.87■□□□□ 0.45
TMCO3-209ENST00000619336 ANO1Q5XXA6 986 aa17.87■□□□□ 0.45
TMCO3-209ENST00000619336 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
TMCO3-209ENST00000619336 PIH1D3Q9NQM4 214 aaKnown RBP17.87■□□□□ 0.45
TMCO3-209ENST00000619336 PRDM5Q9NQX1 630 aaPredicted RBP17.87■□□□□ 0.45
TMCO3-209ENST00000619336 GNAI2P04899 355 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 CYBAP13498 195 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 ZAP70P43403 619 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 TNNI3KQ59H18 835 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 KIAA1683Q9H0B3 1180 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 SEMA6BQ9H3T3 888 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 FPGT-TNNI3KV9GXZ4 949 aa17.86■□□□□ 0.45
TMCO3-209ENST00000619336 SPDYE16A6NNV3 312 aaPredicted RBP17.85■□□□□ 0.45
TMCO3-209ENST00000619336 MYCNP04198 464 aaPredicted RBP17.85■□□□□ 0.45
TMCO3-209ENST00000619336 CYP7A1P22680 504 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 RARSP54136 660 aaKnown RBP17.85■□□□□ 0.45
TMCO3-209ENST00000619336 USP14P54578 494 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 TATDN1Q6P1N9 297 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 SLC39A5Q6ZMH5 540 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 MIGA1Q8NAN2 632 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 MYLIPQ8WY64 445 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 BADQ92934 168 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 RPAP3Q9H6T3 665 aaPredicted RBP17.85■□□□□ 0.45
TMCO3-209ENST00000619336 TNNQ9UQP3 1299 aa17.85■□□□□ 0.45
TMCO3-209ENST00000619336 ZNF236Q9UL36 1845 aa17.84■□□□□ 0.45
TMCO3-209ENST00000619336 KBTBD13C9JR72 458 aa17.84■□□□□ 0.45
TMCO3-209ENST00000619336 USP5P45974 858 aa17.84■□□□□ 0.45
TMCO3-209ENST00000619336 TRIM60Q495X7 471 aa17.84■□□□□ 0.45
TMCO3-209ENST00000619336 LBX2Q6XYB7 198 aa17.84■□□□□ 0.45
TMCO3-209ENST00000619336 ARHGAP45Q92619 1136 aa17.84■□□□□ 0.45
TMCO3-209ENST00000619336 TTYH1Q9H313 450 aaPredicted RBP17.84■□□□□ 0.45
TMCO3-209ENST00000619336 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.44
TMCO3-209ENST00000619336 IGHA2P01877 340 aa17.83■□□□□ 0.44
TMCO3-209ENST00000619336 ADORA2AP29274 412 aa17.83■□□□□ 0.44
TMCO3-209ENST00000619336 ABCB5Q2M3G0 1257 aa17.83■□□□□ 0.44
TMCO3-209ENST00000619336 CERKLQ49MI3 558 aaPredicted RBP17.83■□□□□ 0.44
TMCO3-209ENST00000619336 DPP9Q86TI2 863 aa17.83■□□□□ 0.44
TMCO3-209ENST00000619336 ARRDC4Q8NCT1 418 aa17.83■□□□□ 0.44
TMCO3-209ENST00000619336 GPR108Q9NPR9 543 aa17.83■□□□□ 0.44
TMCO3-209ENST00000619336 SERPINB13Q9UIV8 391 aa17.83■□□□□ 0.44
TMCO3-209ENST00000619336 IDH1O75874 414 aaKnown RBP17.82■□□□□ 0.44
TMCO3-209ENST00000619336 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
TMCO3-209ENST00000619336 SH3RF1Q7Z6J0 888 aa17.82■□□□□ 0.44
TMCO3-209ENST00000619336 MOV10L1Q9BXT6 1211 aaKnown RBP17.82■□□□□ 0.44
TMCO3-209ENST00000619336 EHD4Q9H223 541 aa17.82■□□□□ 0.44
TMCO3-209ENST00000619336 PDLIM7Q9NR12 457 aa17.82■□□□□ 0.44
TMCO3-209ENST00000619336 TTC28Q96AY4 2481 aa17.81■□□□□ 0.44
TMCO3-209ENST00000619336 ADCYAP1R1P41586 468 aa17.81■□□□□ 0.44
TMCO3-209ENST00000619336 SMAD3P84022 425 aaKnown RBP17.81■□□□□ 0.44
TMCO3-209ENST00000619336 OLFML2BQ68BL8 750 aa17.81■□□□□ 0.44
TMCO3-209ENST00000619336 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
TMCO3-209ENST00000619336 CABP5Q9NP86 173 aa17.81■□□□□ 0.44
TMCO3-209ENST00000619336 PRDM6Q9NQX0 595 aa17.81■□□□□ 0.44
TMCO3-209ENST00000619336 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
TMCO3-209ENST00000619336 A0A0G2JMZ2 1700 aa17.81■□□□□ 0.44
TMCO3-209ENST00000619336 NAV1Q8NEY1 1877 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 TRIM43BA6NCK2 446 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 SEPT4O43236 478 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 TRIM27P14373 513 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 FOSL2P15408 326 aa17.8■□□□□ 0.44
TMCO3-209ENST00000619336 GUCY1A2P33402 732 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms