RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 USP17L18D6R9N7 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L22D6RA61 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L17D6RBQ6 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L19D6RCP7 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L20D6RJB6 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 GLRX3O76003 335 aaKnown RBP21.25■□□□□ 0.99
RETREG3-210ENST00000590541 GH2P01242 217 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 IGHA2P01877 340 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 HOXC6P09630 235 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 CNGA1P29973 690 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 RARSP54136 660 aaKnown RBP21.25■□□□□ 0.99
RETREG3-210ENST00000590541 CCNA1P78396 465 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L24Q0WX57 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 SHHQ15465 462 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 ZYXQ15942 572 aaKnown RBP21.25■□□□□ 0.99
RETREG3-210ENST00000590541 CATSPERGQ6ZRH7 1159 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 MIER1Q8N108 512 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 TRPV1Q8NER1 839 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 SPTBN5Q9NRC6 3674 aaKnown RBP21.25■□□□□ 0.99
RETREG3-210ENST00000590541 PRKAG2Q9UGJ0 569 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 HLA-DOAP06340 250 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 CYP2C19P33261 490 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 ATP2B2Q01814 1243 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 GRB14Q14449 540 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 C9orf50Q5SZB4 431 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 WDR78Q5VTH9 848 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 SEMA6BQ9H3T3 888 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 BTBD7Q9P203 1132 aa21.24■□□□□ 0.99
RETREG3-210ENST00000590541 PNMA6EA0A0J9YXQ4 647 aa21.23■□□□□ 0.99
RETREG3-210ENST00000590541 CYP2E1P05181 493 aaPredicted RBP21.23■□□□□ 0.99
RETREG3-210ENST00000590541 LBX2Q6XYB7 198 aa21.23■□□□□ 0.99
RETREG3-210ENST00000590541 MAFAQ8NHW3 353 aaPredicted RBP21.23■□□□□ 0.99
RETREG3-210ENST00000590541 RLFQ13129 1914 aa21.22■□□□□ 0.99
RETREG3-210ENST00000590541 CYBAP13498 195 aa21.22■□□□□ 0.99
RETREG3-210ENST00000590541 DYNLL1P63167 89 aaKnown RBP21.22■□□□□ 0.99
RETREG3-210ENST00000590541 G3BP1Q13283 466 aaKnown RBP eCLIP21.22■□□□□ 0.99
RETREG3-210ENST00000590541 GJC2Q5T442 439 aaPredicted RBP21.22■□□□□ 0.99
RETREG3-210ENST00000590541 TATDN1Q6P1N9 297 aa21.22■□□□□ 0.99
RETREG3-210ENST00000590541 FEZ1Q99689 392 aa21.22■□□□□ 0.99
RETREG3-210ENST00000590541 ATP11BQ9Y2G3 1177 aa21.22■□□□□ 0.99
RETREG3-210ENST00000590541 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
RETREG3-210ENST00000590541 VCAM1P19320 739 aa21.21■□□□□ 0.99
RETREG3-210ENST00000590541 TTC39AQ5SRH9 613 aa21.21■□□□□ 0.99
RETREG3-210ENST00000590541 ATF7IPQ6VMQ6 1270 aa21.21■□□□□ 0.99
RETREG3-210ENST00000590541 SLC39A5Q6ZMH5 540 aa21.21■□□□□ 0.99
RETREG3-210ENST00000590541 KIAA1683Q9H0B3 1180 aa21.21■□□□□ 0.99
RETREG3-210ENST00000590541 TTYH1Q9H313 450 aaPredicted RBP21.21■□□□□ 0.99
RETREG3-210ENST00000590541 IVNS1ABPQ9Y6Y0 642 aa21.21■□□□□ 0.99
RETREG3-210ENST00000590541 MYO5AQ9Y4I1 1855 aaKnown RBP21.21■□□□□ 0.99
RETREG3-210ENST00000590541 SPDYE16A6NNV3 312 aaPredicted RBP21.2■□□□□ 0.98
RETREG3-210ENST00000590541 USP14P54578 494 aa21.2■□□□□ 0.98
RETREG3-210ENST00000590541 ACER1Q8TDN7 264 aa21.2■□□□□ 0.98
RETREG3-210ENST00000590541 MYLIPQ8WY64 445 aa21.2■□□□□ 0.98
RETREG3-210ENST00000590541 DBNDD2Q9BQY9 259 aa21.2■□□□□ 0.98
RETREG3-210ENST00000590541 RAB3GAP1Q15042 981 aa21.19■□□□□ 0.98
RETREG3-210ENST00000590541 BADQ92934 168 aa21.19■□□□□ 0.98
RETREG3-210ENST00000590541 GPR108Q9NPR9 543 aa21.19■□□□□ 0.98
RETREG3-210ENST00000590541 PIH1D3Q9NQM4 214 aaKnown RBP21.19■□□□□ 0.98
RETREG3-210ENST00000590541 CDH23Q9H251 3354 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 ZAP70P43403 619 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 SMAD3P84022 425 aaKnown RBP21.18■□□□□ 0.98
RETREG3-210ENST00000590541 SNX17Q15036 470 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 TNNI3KQ59H18 835 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 CCDC158Q5M9N0 1113 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 ANO1Q5XXA6 986 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 ARRDC4Q8NCT1 418 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 PRDM6Q9NQX0 595 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 PRDM5Q9NQX1 630 aaPredicted RBP21.18■□□□□ 0.98
RETREG3-210ENST00000590541 FPGT-TNNI3KV9GXZ4 949 aa21.18■□□□□ 0.98
RETREG3-210ENST00000590541 MYH1P12882 1939 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 IGSF3O75054 1194 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 GNAI2P04899 355 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 HNRNPUQ00839 825 aaKnown RBP eCLIP21.17■□□□□ 0.98
RETREG3-210ENST00000590541 TRIM60Q495X7 471 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 OLFML2BQ68BL8 750 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 SH3RF1Q7Z6J0 888 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 ZNF512BQ96KM6 892 aaPredicted RBP21.17■□□□□ 0.98
RETREG3-210ENST00000590541 EHD4Q9H223 541 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 RPAP3Q9H6T3 665 aaPredicted RBP21.17■□□□□ 0.98
RETREG3-210ENST00000590541 PDLIM7Q9NR12 457 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 SERPINB13Q9UIV8 391 aa21.17■□□□□ 0.98
RETREG3-210ENST00000590541 PRUNE2Q8WUY3 3088 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 ZNF236Q9UL36 1845 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 TRIM43BA6NCK2 446 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 KBTBD13C9JR72 458 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 CYP7A1P22680 504 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 ADORA2AP29274 412 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 ABCB5Q2M3G0 1257 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 CERKLQ49MI3 558 aaPredicted RBP21.16■□□□□ 0.98
RETREG3-210ENST00000590541 DPP9Q86TI2 863 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 MIGA1Q8NAN2 632 aa21.16■□□□□ 0.98
RETREG3-210ENST00000590541 TRIM43Q96BQ3 446 aaPredicted RBP21.16■□□□□ 0.98
RETREG3-210ENST00000590541 SEPT4O43236 478 aa21.15■□□□□ 0.98
RETREG3-210ENST00000590541 GUCY1A2P33402 732 aa21.15■□□□□ 0.98
RETREG3-210ENST00000590541 MOV10L1Q9BXT6 1211 aaKnown RBP21.15■□□□□ 0.98
RETREG3-210ENST00000590541 TNNQ9UQP3 1299 aa21.15■□□□□ 0.98
RETREG3-210ENST00000590541 COBLO75128 1261 aa21.14■□□□□ 0.97
RETREG3-210ENST00000590541 SHMT1P34896 483 aa21.14■□□□□ 0.97
RETREG3-210ENST00000590541 USP5P45974 858 aa21.14■□□□□ 0.97
RETREG3-210ENST00000590541 STRNO43815 780 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms