RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ASCC2	Q9H1I8	757 aa	Predicted RBP	20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	HELLS	Q9NRZ9	838 aa		20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	TRIM17	Q9Y577	477 aa		20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	TACC3	Q9Y6A5	838 aa		20.73	■□□□□ 0.91
MBD1-221	ENST00000589867	TRIM6-TRIM34	B2RNG4	842 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	CAPN15	O75808	1086 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	RASA1	P20936	1047 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	HOXA7	P31268	230 aa	Predicted RBP	20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	KIAA1755	Q5JYT7	1200 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	RILPL2	Q969X0	211 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	DDRGK1	Q96HY6	314 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	CABP5	Q9NP86	173 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	MGAM	O43451	1857 aa		20.72	■□□□□ 0.91
MBD1-221	ENST00000589867	MINDY4B	A8MYZ0	360 aa		20.71	■□□□□ 0.91
MBD1-221	ENST00000589867	SDS	P20132	328 aa		20.71	■□□□□ 0.91
MBD1-221	ENST00000589867	PKN2	Q16513	984 aa	Known RBP	20.71	■□□□□ 0.91
MBD1-221	ENST00000589867	FBXO46	Q6PJ61	603 aa	Predicted RBP	20.71	■□□□□ 0.91
MBD1-221	ENST00000589867	USP17L2	Q6R6M4	530 aa		20.71	■□□□□ 0.91
MBD1-221	ENST00000589867	TMEM179	Q6ZVK1	233 aa		20.71	■□□□□ 0.91
MBD1-221	ENST00000589867	HPS5	Q9UPZ3	1129 aa		20.71	■□□□□ 0.91
MBD1-221	ENST00000589867	MPHOSPH10	O00566	681 aa	Known RBP	20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	TDO2	P48775	406 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	MCMDC2	Q4G0Z9	681 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	STK11IP	Q8N1F8	1099 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	TRIM47	Q96LD4	638 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	CCDC17	Q96LX7	622 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	EFCC1	Q9HA90	598 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	PTPN22	Q9Y2R2	807 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	RLF	Q13129	1914 aa		20.7	■□□□□ 0.9
MBD1-221	ENST00000589867	PEX10	O60683	326 aa		20.69	■□□□□ 0.9
MBD1-221	ENST00000589867	APP	P05067	770 aa		20.69	■□□□□ 0.9
MBD1-221	ENST00000589867	ZYX	Q15942	572 aa	Known RBP	20.69	■□□□□ 0.9
MBD1-221	ENST00000589867	TTC22	Q5TAA0	569 aa		20.69	■□□□□ 0.9
MBD1-221	ENST00000589867	AMOTL1	Q8IY63	956 aa		20.69	■□□□□ 0.9
MBD1-221	ENST00000589867	P2RX7	Q99572	595 aa	Known RBP	20.69	■□□□□ 0.9
MBD1-221	ENST00000589867	TMOD4	Q9NZQ9	345 aa		20.69	■□□□□ 0.9
MBD1-221	ENST00000589867	ECM2	O94769	699 aa	Predicted RBP	20.68	■□□□□ 0.9
MBD1-221	ENST00000589867	VCAM1	P19320	739 aa		20.68	■□□□□ 0.9
MBD1-221	ENST00000589867	ALX1	Q15699	326 aa		20.68	■□□□□ 0.9
MBD1-221	ENST00000589867	IL25	Q9H293	177 aa		20.68	■□□□□ 0.9
MBD1-221	ENST00000589867	IGKV6D-41	A0A0C4DH26	115 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	PPARA	Q07869	468 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	SKAP1	Q86WV1	359 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	ANKRD13C	Q8N6S4	541 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	FEZ1	Q99689	392 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	NAPB	Q9H115	298 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	TXNRD2	Q9NNW7	524 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	INCENP	Q9NQS7	918 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	PNMA3	Q9UL41	463 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	TMX2	Q9Y320	296 aa		20.67	■□□□□ 0.9
MBD1-221	ENST00000589867	BRCA2	P51587	3418 aa		20.66	■□□□□ 0.9
MBD1-221	ENST00000589867	PRDM1	O75626	825 aa		20.66	■□□□□ 0.9
MBD1-221	ENST00000589867	HSPD1	P10809	573 aa	Known RBP	20.66	■□□□□ 0.9
MBD1-221	ENST00000589867	PSMC4	P43686	418 aa		20.66	■□□□□ 0.9
MBD1-221	ENST00000589867	SMCR8	Q8TEV9	937 aa	Predicted RBP	20.66	■□□□□ 0.9
MBD1-221	ENST00000589867	NACAP1	Q9BZK3	213 aa		20.66	■□□□□ 0.9
MBD1-221	ENST00000589867	CCDC171	Q6TFL3	1326 aa		20.66	■□□□□ 0.9
MBD1-221	ENST00000589867	CCDC85C	A6NKD9	419 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	FGA	P02671	866 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	EEF2	P13639	858 aa	Known RBP	20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	OSBP	P22059	807 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	HERVK_113	P62684	666 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	ICA1	Q05084	483 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	PABPC4	Q13310	644 aa	Known RBP eCLIP	20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	FAM110C	Q1W6H9	321 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	CATSPERG	Q6ZRH7	1159 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	RBPJL	Q9UBG7	517 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	MORF4L1	Q9UBU8	362 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	ANAPC4	Q9UJX5	808 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	PTCH2	Q9Y6C5	1203 aa		20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	KIAA0100	Q14667	2235 aa	Known RBP	20.65	■□□□□ 0.9
MBD1-221	ENST00000589867	PARP14	Q460N5	1801 aa		20.64	■□□□□ 0.9
MBD1-221	ENST00000589867	USP14	P54578	494 aa		20.64	■□□□□ 0.89
MBD1-221	ENST00000589867	CTDSPL2	Q05D32	466 aa		20.64	■□□□□ 0.89
MBD1-221	ENST00000589867	NKX2-3	Q8TAU0	364 aa		20.64	■□□□□ 0.89
MBD1-221	ENST00000589867	NBPF3	Q9H094	633 aa		20.64	■□□□□ 0.89
MBD1-221	ENST00000589867	CNMD	O75829	334 aa		20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	FGR	P09769	529 aa		20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	GCLC	P48506	637 aa	Predicted RBP	20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	IRX3	P78415	501 aa	Predicted RBP	20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	CWC27	Q6UX04	472 aa	Known RBP	20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	RPAP3	Q9H6T3	665 aa	Predicted RBP	20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	KANSL2	Q9H9L4	492 aa		20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	MKNK2	Q9HBH9	465 aa		20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	SRRD	Q9UH36	339 aa		20.63	■□□□□ 0.89
MBD1-221	ENST00000589867	PLXNB2	O15031	1838 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	PLIN4	Q96Q06	1357 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	ZMYM6	O95789	1325 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L15	C9J2P7	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L13	C9JLJ4	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L11	C9JVI0	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L18	D6R9N7	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L22	D6RA61	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L17	D6RBQ6	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L19	D6RCP7	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L20	D6RJB6	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	USP17L24	Q0WX57	530 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	KIF22	Q14807	665 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867		Q3C1V9	767 aa		20.62	■□□□□ 0.89

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