RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 FAM47AQ5JRC9 791 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 STRIP1Q5VSL9 837 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 FMR1NBQ8N0W7 255 aaPredicted RBP11.97□□□□□ -0.49
VPS25-203ENST00000589520 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
VPS25-203ENST00000589520 RNF214Q8ND24 703 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 GPR101Q96P66 508 aaPredicted RBP11.97□□□□□ -0.49
VPS25-203ENST00000589520 CCDC39Q9UFE4 941 aa11.97□□□□□ -0.49
VPS25-203ENST00000589520 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
VPS25-203ENST00000589520 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
VPS25-203ENST00000589520 FLT1P17948 1338 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 BTBD18B2RXH4 712 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 RIMBP2O15034 1052 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 NOVP48745 357 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 GRM4Q14833 912 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 PTPAQ15257 358 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 GRIK5Q16478 980 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 CAMK4Q16566 473 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 AXDND1Q5T1B0 1012 aaPredicted RBP11.96□□□□□ -0.49
VPS25-203ENST00000589520 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 MAPKAPK5Q8IW41 473 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
VPS25-203ENST00000589520 PNMA1Q8ND90 353 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 CCDC34Q96HJ3 373 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 SDF4Q9BRK5 362 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 PHF20Q9BVI0 1012 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 NAT10Q9H0A0 1025 aaKnown RBP11.96□□□□□ -0.49
VPS25-203ENST00000589520 VPS33BQ9H267 617 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 ANO10Q9NW15 660 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 HOOK1Q9UJC3 728 aaKnown RBP11.96□□□□□ -0.49
VPS25-203ENST00000589520 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
VPS25-203ENST00000589520 LTBP1Q14766 1721 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
VPS25-203ENST00000589520 SCG2P13521 617 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 RASA1P20936 1047 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 GUCY1A2P33402 732 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 PLCD1P51178 756 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 ZRSR1Q15695 479 aaKnown RBP11.95□□□□□ -0.5
VPS25-203ENST00000589520 PKN1Q16512 942 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 STX1AQ16623 288 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 PFKFB3Q16875 520 aaPredicted RBP11.95□□□□□ -0.5
VPS25-203ENST00000589520 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 SPON1Q9HCB6 807 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 FAM13BQ9NYF5 915 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
VPS25-203ENST00000589520 MRVI1Q9Y6F6 885 aa11.95□□□□□ -0.5
VPS25-203ENST00000589520 ESPNB1AK53 854 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 ZNF202O95125 648 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 PTPREP23469 700 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 ZSCAN30Q86W11 494 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
VPS25-203ENST00000589520 CCDC148Q8NFR7 591 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
VPS25-203ENST00000589520 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 CCDC17Q96LX7 622 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 ZDHHC15Q96MV8 337 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 PYM1Q9BRP8 204 aaKnown RBP11.94□□□□□ -0.5
VPS25-203ENST00000589520 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS25-203ENST00000589520 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
VPS25-203ENST00000589520 GOLPH3LQ9H4A5 285 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 GJB4Q9NTQ9 266 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 HPSEQ9Y251 543 aa11.94□□□□□ -0.5
VPS25-203ENST00000589520 PLIN4Q96Q06 1357 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 CNTNAP5Q8WYK1 1306 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 LAMB1P07942 1786 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 DLEC1Q9Y238 1755 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
VPS25-203ENST00000589520 GOLGA6L6A8MZA4 724 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 hCG_1984214I3L0E3 225 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 SYKP43405 635 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 ZNF165P49910 485 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 RESP18Q5W5W9 173 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 CKAP2LQ8IYA6 745 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 RTKN2Q8IZC4 609 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 ZNF713Q8N859 430 aaPredicted RBP11.93□□□□□ -0.5
VPS25-203ENST00000589520 FERMT2Q96AC1 680 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 EHD4Q9H223 541 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 KCNJ14Q9UNX9 436 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 SRPRBQ9Y5M8 271 aaKnown RBP11.93□□□□□ -0.5
VPS25-203ENST00000589520 MYH15Q9Y2K3 1946 aa11.93□□□□□ -0.5
VPS25-203ENST00000589520 ANKRD31Q8N7Z5 1873 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 A0A1B0GVL5 298 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 TRIM75PA6NK02 468 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 PARP1P09874 1014 aaKnown RBP11.92□□□□□ -0.5
VPS25-203ENST00000589520 PFKFB1P16118 471 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 MSNP26038 577 aaKnown RBP11.92□□□□□ -0.5
VPS25-203ENST00000589520 CLCN1P35523 988 aa11.92□□□□□ -0.5
VPS25-203ENST00000589520 NDUFA8P51970 172 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms