RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 RRP12Q5JTH9 1297 aaKnown RBP23.13■■□□□ 1.29
CIRBP-220ENST00000588917 ZNF280CQ8ND82 737 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 USP26Q9BXU7 913 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 NBPF3Q9H094 633 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 RNF186Q9NXI6 227 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 AFG3L2Q9Y4W6 797 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 MANSC4A6NHS7 340 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-220ENST00000588917 E7EWF7 191 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 TRPA1O75762 1119 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 JAG1P78504 1218 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 SEPT2Q15019 361 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 TSGA10IPQ3SY00 556 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 CCDC178Q5BJE1 867 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 TBC1D10CQ8IV04 446 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 NCOA7Q8NI08 942 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 INCENPQ9NQS7 918 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 LAMB1P07942 1786 aa23.12■■□□□ 1.29
CIRBP-220ENST00000588917 CASP8AP2Q9UKL3 1982 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 C19orf81C9J6K1 198 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 IRF6O14896 467 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 HSPA4P34932 840 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 MLLT1Q03111 559 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-220ENST00000588917 SNAPC2Q13487 334 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 C8orf34Q49A92 452 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 FAM47AQ5JRC9 791 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 RALYLQ86SE5 291 aaKnown RBP23.11■■□□□ 1.29
CIRBP-220ENST00000588917 SH2D4AQ9H788 454 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 ARHGEF10LQ9HCE6 1279 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 KCNH4Q9UQ05 1017 aa23.11■■□□□ 1.29
CIRBP-220ENST00000588917 USP17L10C9JJH3 530 aa23.1■■□□□ 1.29
CIRBP-220ENST00000588917 SPP2Q13103 211 aa23.1■■□□□ 1.29
CIRBP-220ENST00000588917 IQCA1Q86XH1 822 aa23.1■■□□□ 1.29
CIRBP-220ENST00000588917 TCP11L1Q9NUJ3 509 aa23.1■■□□□ 1.29
CIRBP-220ENST00000588917 CETPP11597 493 aa23.09■■□□□ 1.29
CIRBP-220ENST00000588917 GUCY1A2P33402 732 aa23.09■■□□□ 1.29
CIRBP-220ENST00000588917 SREBF2Q12772 1141 aa23.09■■□□□ 1.29
CIRBP-220ENST00000588917 FASTKD5Q7L8L6 764 aaKnown RBP23.09■■□□□ 1.29
CIRBP-220ENST00000588917 CNKSR2Q8WXI2 1034 aa23.09■■□□□ 1.29
CIRBP-220ENST00000588917 NYAP2Q9P242 653 aa23.09■■□□□ 1.29
CIRBP-220ENST00000588917 TACC3Q9Y6A5 838 aa23.09■■□□□ 1.29
CIRBP-220ENST00000588917 GJA5P36382 358 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 USP14P54578 494 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 BACE1P56817 501 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 ICA1Q05084 483 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 KCNB2Q92953 911 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 TTC14Q96N46 770 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.08■■□□□ 1.29
CIRBP-220ENST00000588917 MTMR4Q9NYA4 1195 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 ZSWIM5Q9P217 1185 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 SYNPO2Q9UMS6 1093 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 PLIN4Q96Q06 1357 aa23.08■■□□□ 1.29
CIRBP-220ENST00000588917 IGKV6D-41A0A0C4DH26 115 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 TRIM75PA6NK02 468 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 B4E1Z4 1266 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 KDM4AO75164 1064 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 TTLL1O95922 423 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 HMGB1P09429 215 aaKnown RBP23.07■■□□□ 1.28
CIRBP-220ENST00000588917 MKRN3Q13064 507 aaKnown RBP23.07■■□□□ 1.28
CIRBP-220ENST00000588917 SHROOM1Q2M3G4 852 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-220ENST00000588917 OTUD7BQ6GQQ9 843 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 MKL1Q969V6 931 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 DOCK1Q14185 1865 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 NEDD4P46934 1319 aa23.07■■□□□ 1.28
CIRBP-220ENST00000588917 TESPA1A2RU30 521 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-220ENST00000588917 EEF2P13639 858 aaKnown RBP23.06■■□□□ 1.28
CIRBP-220ENST00000588917 TM4SF4P48230 202 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 SH3D19Q5HYK7 790 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 USP17L2Q6R6M4 530 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 MS4A4AQ96JQ5 239 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 FEZ1Q99689 392 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 KIAA1683Q9H0B3 1180 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 UPF2Q9HAU5 1272 aaKnown RBP23.06■■□□□ 1.28
CIRBP-220ENST00000588917 TMOD4Q9NZQ9 345 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 CLIP2Q9UDT6 1046 aa23.06■■□□□ 1.28
CIRBP-220ENST00000588917 OTOFQ9HC10 1997 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-220ENST00000588917 PSMA5P28066 241 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 MCM5P33992 734 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 ATP2B2Q01814 1243 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 SART3Q15020 963 aaKnown RBP23.05■■□□□ 1.28
CIRBP-220ENST00000588917 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-220ENST00000588917 CCDC84Q86UT8 332 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-220ENST00000588917 DGKHQ86XP1 1220 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 CEP95Q96GE4 821 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 NEK1Q96PY6 1258 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 UBAC1Q9BSL1 405 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 MTA3Q9BTC8 594 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-220ENST00000588917 TMX2Q9Y320 296 aa23.05■■□□□ 1.28
CIRBP-220ENST00000588917 LAMA4Q16363 1823 aa23.04■■□□□ 1.28
CIRBP-220ENST00000588917 CCL15-CCL14A0A0B4J2E2 113 aa23.04■■□□□ 1.28
CIRBP-220ENST00000588917 ERICH2A1L162 156 aa23.04■■□□□ 1.28
CIRBP-220ENST00000588917 CCL15Q16663 113 aa23.04■■□□□ 1.28
CIRBP-220ENST00000588917 SIAH1Q8IUQ4 282 aa23.04■■□□□ 1.28
CIRBP-220ENST00000588917 PROCA1Q8NCQ7 364 aaPredicted RBP23.04■■□□□ 1.28
CIRBP-220ENST00000588917 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
CIRBP-220ENST00000588917 IL17RBQ9NRM6 502 aa23.04■■□□□ 1.28
CIRBP-220ENST00000588917 STX8Q9UNK0 236 aa23.04■■□□□ 1.28
CIRBP-220ENST00000588917 SEC24BO95487 1268 aa23.03■■□□□ 1.28
CIRBP-220ENST00000588917 NOVP48745 357 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms