RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 PRUNE2Q8WUY3 3088 aa10.85□□□□□ -0.67
CDK5RAP3-224ENST00000582275 SPTBN5Q9NRC6 3674 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-224ENST00000582275 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 ATAD5Q96QE3 1844 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 GALR2O43603 387 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 SLURP2P0DP57 97 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 PTPREP23469 700 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 PHKA1P46020 1223 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 Q3C1V9 767 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 TRIM60Q495X7 471 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 CCDC174Q6PII3 467 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 USP17L2Q6R6M4 530 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 USP38Q8NB14 1042 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 TIFAQ96CG3 184 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 TRIM34Q9BYJ4 488 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 HCN4Q9Y3Q4 1203 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 MYO9BQ13459 2157 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 RLFQ13129 1914 aa10.84□□□□□ -0.67
CDK5RAP3-224ENST00000582275 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 WDR78Q5VTH9 848 aa10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 OLFML2BQ68BL8 750 aa10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CCDC102BQ68D86 513 aa10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 ATG9AQ7Z3C6 839 aa10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 FOXP4Q8IVH2 680 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 NOL10Q9BSC4 688 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 SLC5A4Q9NY91 659 aa10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 PCDHB13Q9Y5F0 798 aa10.83□□□□□ -0.68
CDK5RAP3-224ENST00000582275 LAMA2P24043 3122 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 TRIM43BA6NCK2 446 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L15C9J2P7 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L13C9JLJ4 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L11C9JVI0 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L18D6R9N7 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L22D6RA61 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L17D6RBQ6 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L19D6RCP7 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L20D6RJB6 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 SEPT4O43236 478 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CLTBP09497 229 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CYBAP13498 195 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 RAG1P15918 1043 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 IL15P40933 162 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 RFX5P48382 616 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 MECOMQ03112 1051 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 FPGSQ05932 587 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP17L24Q0WX57 530 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 RASGRF1Q13972 1273 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 GRB14Q14449 540 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 ATF7IPQ6VMQ6 1270 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 TRIM43Q96BQ3 446 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 FLRT1Q9NZU1 646 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
CDK5RAP3-224ENST00000582275 EYSQ5T1H1 3165 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 KIAA0355O15063 1070 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 STRNO43815 780 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 PEX10O60683 326 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 PLCG2P16885 1265 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CYP2C19P33261 490 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP14P54578 494 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 TLE2Q04725 743 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 MVPQ14764 893 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 AAK1Q2M2I8 961 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 LBX2Q6XYB7 198 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 DPP9Q86TI2 863 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 TEX11Q8IYF3 940 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CRACR2BQ8N4Y2 399 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 PTPRCP08575 1304 aa10.81□□□□□ -0.68
CDK5RAP3-224ENST00000582275 BAG3O95817 575 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 ADCYAP1R1P41586 468 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 SH3RF1Q7Z6J0 888 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 METTL16Q86W50 562 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 PPM1EQ8WY54 764 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 C12orf42Q96LP6 360 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 FEZ1Q99689 392 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 USP44Q9H0E7 712 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 SIL1Q9H173 461 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 ZBTB21Q9ULJ3 1066 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 AKAP2Q9Y2D5 859 aa10.8□□□□□ -0.68
CDK5RAP3-224ENST00000582275 PIEZO1Q92508 2521 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 IGHA2P01877 340 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 LRRC41Q15345 812 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 RNF180Q86T96 592 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 TRPV1Q8NER1 839 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 EMILIN3Q9NT22 766 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 TMEM39AQ9NV64 488 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 NRBP1Q9UHY1 535 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 PHF24Q9UPV7 400 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 NDUFB9Q9Y6M9 179 aa10.79□□□□□ -0.68
CDK5RAP3-224ENST00000582275 DCDC2CA8MYV0 355 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CNMDO75829 334 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 HLA-DOAP06340 250 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 RAB30Q15771 203 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CATSPERGQ6ZRH7 1159 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 CCDC129Q6ZRS4 1044 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 FERMT2Q96AC1 680 aa10.78□□□□□ -0.68
CDK5RAP3-224ENST00000582275 NSUN4Q96CB9 384 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms