RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 USP40Q9NVE5 1235 aa20.92■□□□□ 0.94
EIF4A1-216ENST00000580888 CCL15-CCL14A0A0B4J2E2 113 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 STX6O43752 255 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 PPIL2Q13356 520 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 CCL15Q16663 113 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 SLF2Q8IX21 1173 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 MIGA1Q8NAN2 632 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 STAG1Q8WVM7 1258 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 ZKSCAN4Q969J2 545 aaPredicted RBP20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 CHMP4CQ96CF2 233 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 ERO1AQ96HE7 468 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 MTA3Q9BTC8 594 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 LRRC2Q9BYS8 371 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 TACC3Q9Y6A5 838 aa20.91■□□□□ 0.94
EIF4A1-216ENST00000580888 RBBP6Q7Z6E9 1792 aaKnown RBP20.9■□□□□ 0.94
EIF4A1-216ENST00000580888 ATRNL1Q5VV63 1379 aa20.9■□□□□ 0.94
EIF4A1-216ENST00000580888 PRC1O43663 620 aa20.9■□□□□ 0.94
EIF4A1-216ENST00000580888 ZSCAN22P10073 491 aaPredicted RBP20.9■□□□□ 0.94
EIF4A1-216ENST00000580888 TRAK2O60296 914 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 ENTPD3O75355 529 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 CETPP11597 493 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 PDIA3P30101 505 aaKnown RBP20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 SOX10P56693 466 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 PPATQ06203 517 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 APOBRQ0VD83 1088 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 SCRN1Q12765 414 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 TRDNQ13061 729 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 SKOR2Q2VWA4 1001 aaPredicted RBP20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 NOL9Q5SY16 702 aaKnown RBP20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 AKNAD1Q5T1N1 836 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 OTOP1Q7RTM1 612 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 RALYLQ86SE5 291 aaKnown RBP20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 MTMR6Q9Y217 621 aa20.89■□□□□ 0.93
EIF4A1-216ENST00000580888 PTPRFP10586 1907 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 GOLGA6L22H0YM25 854 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 IRF6O14896 467 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 FGRP09769 529 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 PPP4CP60510 307 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 DYNLL1P63167 89 aaKnown RBP20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 SP3Q02447 781 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 TCP10Q12799 353 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 SNAPC2Q13487 334 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 CYB5R4Q7L1T6 521 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 DZIP1Q86YF9 867 aaKnown RBP20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 NKX2-3Q8TAU0 364 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 TMEM87BQ96K49 555 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 CNNM2Q9H8M5 875 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 LMBRD1Q9NUN5 540 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 TRIM17Q9Y577 477 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 DOCK1Q14185 1865 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 PHIPQ8WWQ0 1821 aa20.88■□□□□ 0.93
EIF4A1-216ENST00000580888 MROH7-TTC4A0A0A0MT08 1334 aa20.87■□□□□ 0.93
EIF4A1-216ENST00000580888 NEDD4P46934 1319 aa20.87■□□□□ 0.93
EIF4A1-216ENST00000580888 PDCP20941 246 aa20.87■□□□□ 0.93
EIF4A1-216ENST00000580888 INPP5BP32019 993 aa20.87■□□□□ 0.93
EIF4A1-216ENST00000580888 TAF1CQ15572 869 aaPredicted RBP20.87■□□□□ 0.93
EIF4A1-216ENST00000580888 ZFYVE28Q9HCC9 887 aa20.87■□□□□ 0.93
EIF4A1-216ENST00000580888 GPR75-ASB3A0A0A6YYF3 556 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 SH2B2O14492 632 aaPredicted RBP20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 NPM3O75607 178 aaKnown RBP20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 CTDNEP1O95476 244 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 TDO2P48775 406 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 FGD1P98174 961 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 MAP3K10Q02779 954 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 CHST3Q7LGC8 479 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 ZFPM1Q8IX07 1006 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 NSUN7Q8NE18 718 aaKnown RBP20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 CD99L2Q8TCZ2 262 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 IGDCC4Q8TDY8 1250 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 KRT23Q9C075 422 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 ATP8A2Q9NTI2 1148 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 KCNH4Q9UQ05 1017 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 KIAA0100Q14667 2235 aaKnown RBP20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 CDK5RAP2Q96SN8 1893 aa20.86■□□□□ 0.93
EIF4A1-216ENST00000580888 WDHD1O75717 1129 aaPredicted RBP20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 F13A1P00488 732 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 PCP11498 1178 aaKnown RBP20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 LIFRP42702 1097 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 GSTO1P78417 241 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 PPARAQ07869 468 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 STK3Q13188 491 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 SBK1Q52WX2 424 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 SGMS1Q86VZ5 419 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 RNF41Q9H4P4 317 aaPredicted RBP20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 GPHNQ9NQX3 736 aaPredicted RBP20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 BRPF3Q9ULD4 1205 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 PTPN22Q9Y2R2 807 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 FOCADQ5VW36 1801 aa20.85■□□□□ 0.93
EIF4A1-216ENST00000580888 COL2A1P02458 1487 aaPredicted RBP20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 B4E1Z4 1266 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 BTBD19C9JJ37 291 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 BTDP43251 543 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 RHBDL3P58872 404 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 HMGN5P82970 282 aaKnown RBP20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 CTDSPL2Q05D32 466 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 MCTP1Q6DN14 999 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 MFSD6Q6ZSS7 791 aa20.84■□□□□ 0.93
EIF4A1-216ENST00000580888 SH3BP5LQ7L8J4 393 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms