RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 LAMA2P24043 3122 aaKnown RBP14.98□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L15C9J2P7 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L13C9JLJ4 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L11C9JVI0 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L18D6R9N7 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L22D6RA61 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L17D6RBQ6 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L19D6RCP7 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L20D6RJB6 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 DNM1LO00429 736 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 MSCO60682 206 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 GH2P01242 217 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 HLA-DOAP06340 250 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 UQCRFS1P1P0C7P4 283 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 FOSL2P15408 326 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 PTPREP23469 700 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 ARID4AP29374 1257 aaPredicted RBP14.97□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L24Q0WX57 530 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 BADQ92934 168 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
PRPF8-208ENST00000573716 RLFQ13129 1914 aa14.96□□□□□ -0.01
PRPF8-208ENST00000573716 KBTBD13C9JR72 458 aa14.96□□□□□ -0.01
PRPF8-208ENST00000573716 CNMDO75829 334 aa14.96□□□□□ -0.01
PRPF8-208ENST00000573716 RAB3GAP1Q15042 981 aa14.96□□□□□ -0.01
PRPF8-208ENST00000573716 TRPV1Q8NER1 839 aa14.96□□□□□ -0.01
PRPF8-208ENST00000573716 NPLOC4Q8TAT6 608 aa14.96□□□□□ -0.01
PRPF8-208ENST00000573716 API5Q9BZZ5 524 aaKnown RBP14.96□□□□□ -0.01
PRPF8-208ENST00000573716 MYH1P12882 1939 aa14.96□□□□□ -0.02
PRPF8-208ENST00000573716 MYO5AQ9Y4I1 1855 aaKnown RBP14.95□□□□□ -0.02
PRPF8-208ENST00000573716 G3BP1Q13283 466 aaKnown RBP eCLIP14.95□□□□□ -0.025e-7■■□□□ 14.4
PRPF8-208ENST00000573716 TRIM60Q495X7 471 aa14.95□□□□□ -0.02
PRPF8-208ENST00000573716 TTC39AQ5SRH9 613 aa14.95□□□□□ -0.02
PRPF8-208ENST00000573716 ATF7IPQ6VMQ6 1270 aa14.95□□□□□ -0.02
PRPF8-208ENST00000573716 SLC39A5Q6ZMH5 540 aa14.95□□□□□ -0.02
PRPF8-208ENST00000573716 ADGRA1Q86SQ6 560 aa14.95□□□□□ -0.02
PRPF8-208ENST00000573716 DPP9Q86TI2 863 aa14.95□□□□□ -0.02
PRPF8-208ENST00000573716 ARRDC4Q8NCT1 418 aa14.95□□□□□ -0.02
PRPF8-208ENST00000573716 TTYH1Q9H313 450 aaPredicted RBP14.95□□□□□ -0.02
PRPF8-208ENST00000573716 GNAI3P08754 354 aa14.94□□□□□ -0.02
PRPF8-208ENST00000573716 DYNLL1P63167 89 aaKnown RBP14.94□□□□□ -0.02
PRPF8-208ENST00000573716 SLFN5Q08AF3 891 aa14.94□□□□□ -0.02
PRPF8-208ENST00000573716 FERMT2Q96AC1 680 aa14.94□□□□□ -0.02
PRPF8-208ENST00000573716 BTBD7Q9P203 1132 aa14.94□□□□□ -0.02
PRPF8-208ENST00000573716 EYSQ5T1H1 3165 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 VCAM1P19320 739 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 ADCYAP1R1P41586 468 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 USP14P54578 494 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 PPP4CP60510 307 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 SMAD3P84022 425 aaKnown RBP14.93□□□□□ -0.02
PRPF8-208ENST00000573716 GRB14Q14449 540 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 CATSPERGQ6ZRH7 1159 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 METTL16Q86W50 562 aaKnown RBP14.93□□□□□ -0.02
PRPF8-208ENST00000573716 SYMPKQ92797 1274 aaKnown RBP14.93□□□□□ -0.02
PRPF8-208ENST00000573716 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
PRPF8-208ENST00000573716 TTC28Q96AY4 2481 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 HOXC6P09630 235 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 CYBAP13498 195 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 USP5P45974 858 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 SH3RF1Q7Z6J0 888 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 ACER1Q8TDN7 264 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 C12orf42Q96LP6 360 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 RNPC3Q96LT9 517 aaKnown RBP14.92□□□□□ -0.02
PRPF8-208ENST00000573716 RPAP3Q9H6T3 665 aaPredicted RBP14.92□□□□□ -0.02
PRPF8-208ENST00000573716 PDLIM7Q9NR12 457 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 VCANP13611 3396 aa14.92□□□□□ -0.02
PRPF8-208ENST00000573716 SPDYE16A6NNV3 312 aaPredicted RBP14.91□□□□□ -0.02
PRPF8-208ENST00000573716 CYP7A1P22680 504 aa14.91□□□□□ -0.02
PRPF8-208ENST00000573716 ADORA2AP29274 412 aa14.91□□□□□ -0.02
PRPF8-208ENST00000573716 OS9Q13438 667 aaPredicted RBP14.91□□□□□ -0.02
PRPF8-208ENST00000573716 ABCB5Q2M3G0 1257 aa14.91□□□□□ -0.02
PRPF8-208ENST00000573716 CCDC158Q5M9N0 1113 aa14.91□□□□□ -0.02
PRPF8-208ENST00000573716 PRAMEF19Q5SWL8 479 aa14.91□□□□□ -0.02
PRPF8-208ENST00000573716 MIGA1Q8NAN2 632 aa14.91□□□□□ -0.02
PRPF8-208ENST00000573716 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
PRPF8-208ENST00000573716 CYP2E1P05181 493 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-208ENST00000573716 MTX1Q13505 466 aa14.9□□□□□ -0.02
PRPF8-208ENST00000573716 CERKLQ49MI3 558 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-208ENST00000573716 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-208ENST00000573716 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
PRPF8-208ENST00000573716 DBNDD2Q9BQY9 259 aa14.9□□□□□ -0.02
PRPF8-208ENST00000573716 TANGO6Q9C0B7 1094 aa14.9□□□□□ -0.02
PRPF8-208ENST00000573716 KIAA1683Q9H0B3 1180 aa14.9□□□□□ -0.02
PRPF8-208ENST00000573716 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
PRPF8-208ENST00000573716 PIH1D3Q9NQM4 214 aaKnown RBP14.9□□□□□ -0.02
PRPF8-208ENST00000573716 PRUNE2Q8WUY3 3088 aa14.9□□□□□ -0.02
PRPF8-208ENST00000573716 PNMA6EA0A0J9YXQ4 647 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 SEPT4O43236 478 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 COL9A1P20849 921 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 ZAP70P43403 619 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 TLE2Q04725 743 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 PLS1Q14651 629 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 LRRC41Q15345 812 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 MOV10L1Q9BXT6 1211 aaKnown RBP14.89□□□□□ -0.03
PRPF8-208ENST00000573716 SERPINB13Q9UIV8 391 aa14.89□□□□□ -0.03
PRPF8-208ENST00000573716 ZNF236Q9UL36 1845 aa14.88□□□□□ -0.03
PRPF8-208ENST00000573716 MPHOSPH10O00566 681 aaKnown RBP14.88□□□□□ -0.03
PRPF8-208ENST00000573716 IDH1O75874 414 aaKnown RBP14.88□□□□□ -0.03
PRPF8-208ENST00000573716 GNAI2P04899 355 aa14.88□□□□□ -0.03
PRPF8-208ENST00000573716 FAM47AQ5JRC9 791 aa14.88□□□□□ -0.03
PRPF8-208ENST00000573716 OLFML2BQ68BL8 750 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms