RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 UBAC1Q9BSL1 405 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 PODXL2Q9NZ53 605 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 ADD3Q9UEY8 706 aaKnown RBP19.85■□□□□ 0.77
SCARF1-205ENST00000571272 WNT7AO00755 349 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 SLC5A1P13866 664 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 EVA1CP58658 441 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 CARD10Q9BWT7 1032 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 CCT6AP40227 531 aaKnown RBP19.85■□□□□ 0.77
SCARF1-205ENST00000571272 BCAMP50895 628 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 AKAP17AQ02040 695 aaKnown RBP19.85■□□□□ 0.77
SCARF1-205ENST00000571272 SRGAP1Q7Z6B7 1085 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 IQSEC3Q9UPP2 1182 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-205ENST00000571272 ZBTB1Q9Y2K1 713 aa19.85■□□□□ 0.77
SCARF1-205ENST00000571272 ABL1P00519 1130 aa19.84■□□□□ 0.77
SCARF1-205ENST00000571272 CUL4BQ13620 913 aa19.84■□□□□ 0.77
SCARF1-205ENST00000571272 SDR42E1Q8WUS8 393 aa19.84■□□□□ 0.77
SCARF1-205ENST00000571272 LRP6O75581 1613 aa19.84■□□□□ 0.77
SCARF1-205ENST00000571272 FXR1P51114 621 aaKnown RBP eCLIP19.84■□□□□ 0.77
SCARF1-205ENST00000571272 KIF4BQ2VIQ3 1234 aa19.84■□□□□ 0.77
SCARF1-205ENST00000571272 NOM1Q5C9Z4 860 aaKnown RBP19.84■□□□□ 0.77
SCARF1-205ENST00000571272 ACRBPQ8NEB7 543 aa19.84■□□□□ 0.77
SCARF1-205ENST00000571272 AATFQ9NY61 560 aaKnown RBP eCLIP19.84■□□□□ 0.77
SCARF1-205ENST00000571272 PAPPAQ13219 1627 aa19.83■□□□□ 0.77
SCARF1-205ENST00000571272 CCDC151A5D8V7 595 aa19.83■□□□□ 0.77
SCARF1-205ENST00000571272 MCM6Q14566 821 aa19.83■□□□□ 0.77
SCARF1-205ENST00000571272 ZNF174Q15697 407 aa19.83■□□□□ 0.77
SCARF1-205ENST00000571272 H3BQF6 201 aa19.83■□□□□ 0.76
SCARF1-205ENST00000571272 MFAP3LO75121 409 aa19.83■□□□□ 0.76
SCARF1-205ENST00000571272 TMTC2Q8N394 836 aa19.83■□□□□ 0.76
SCARF1-205ENST00000571272 CDC5LQ99459 802 aaKnown RBP19.83■□□□□ 0.76
SCARF1-205ENST00000571272 LRP2BPQ9P2M1 347 aa19.83■□□□□ 0.76
SCARF1-205ENST00000571272 CDC23Q9UJX2 597 aa19.83■□□□□ 0.76
SCARF1-205ENST00000571272 COL5A2P05997 1499 aaPredicted RBP19.83■□□□□ 0.76
SCARF1-205ENST00000571272 MROH5Q6ZUA9 1318 aa19.83■□□□□ 0.76
SCARF1-205ENST00000571272 CHD4Q14839 1912 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 CDC25AP30304 524 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 PBX1P40424 430 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 FILIP1LQ4L180 1135 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 BLZF1Q9H2G9 400 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 ANKZF1Q9H8Y5 726 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 TNKSO95271 1327 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 NID2Q14112 1375 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 PPP1R3GB7ZBB8 358 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 GYPCP04921 128 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 PPARAQ07869 468 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 DPYDQ12882 1025 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 CDKAL1Q5VV42 579 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 SLC4A9Q96Q91 983 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 PNKPQ96T60 521 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 TMEM51Q9NW97 253 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 CTNND2Q9UQB3 1225 aa19.82■□□□□ 0.76
SCARF1-205ENST00000571272 V9GY48 417 aaPredicted RBP19.82■□□□□ 0.76
SCARF1-205ENST00000571272 SLC35F6Q8N357 371 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 TXLNBQ8N3L3 684 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 NAA15Q9BXJ9 866 aaKnown RBP19.81■□□□□ 0.76
SCARF1-205ENST00000571272 SUGCTQ9HAC7 445 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 GPS2Q13227 327 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 PKN1Q16512 942 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 JAKMIP3Q5VZ66 844 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 RASGRP2Q7LDG7 609 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 BAZ2BQ9UIF8 2168 aaKnown RBP19.81■□□□□ 0.76
SCARF1-205ENST00000571272 RHOXF2BP0C7M4 288 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 KRT2P35908 639 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 BRD3Q15059 726 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 SH3RF1Q7Z6J0 888 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 RHOXF2Q9BQY4 288 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 RNF26Q9BY78 433 aaPredicted RBP19.81■□□□□ 0.76
SCARF1-205ENST00000571272 ADAM21Q9UKJ8 722 aa19.81■□□□□ 0.76
SCARF1-205ENST00000571272 PLEKHA8P1O95397 391 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 XBP1P17861 261 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 GNAT2P19087 354 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 WWC2Q6AWC2 1192 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 CTAGE1Q96RT6 745 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 VPS16Q9H269 839 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 RNF41Q9H4P4 317 aaPredicted RBP19.8■□□□□ 0.76
SCARF1-205ENST00000571272 PDE11AQ9HCR9 933 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 CTAGE9A4FU28 777 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 RNF225M0QZC1 329 aaPredicted RBP19.8■□□□□ 0.76
SCARF1-205ENST00000571272 CYP19A1P11511 503 aaPredicted RBP19.8■□□□□ 0.76
SCARF1-205ENST00000571272 ADGRA1Q86SQ6 560 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 DZIP3Q86Y13 1208 aaKnown RBP19.8■□□□□ 0.76
SCARF1-205ENST00000571272 CEP112Q8N8E3 955 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 ABCF2Q9UG63 623 aa19.8■□□□□ 0.76
SCARF1-205ENST00000571272 N4BP3O15049 544 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 CAPN2P17655 700 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 CYP7A1P22680 504 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 LMAN1P49257 510 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 GSDMAQ96QA5 445 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 CYP2D7A0A087X1C5 515 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 SEC23AQ15436 765 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 BEND6Q5SZJ8 279 aaPredicted RBP19.79■□□□□ 0.76
SCARF1-205ENST00000571272 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 CNGA4Q8IV77 575 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 PHF20Q9BVI0 1012 aa19.79■□□□□ 0.76
SCARF1-205ENST00000571272 PNPLA7Q6ZV29 1317 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 MAP2K7O14733 419 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 ERVK-24P63145 666 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 KRT31Q15323 416 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 MYH3P11055 1940 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 RAD51AP2Q09MP3 1159 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms