RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NRKQ7Z2Y5 1582 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 STRCQ7RTU9 1775 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 LOC102724428A0A0B4J2F2 783 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 SMNDC1O75940 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
CNOT1-222ENST00000570139 GHRHP01286 108 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 KCNA6P17658 529 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 GYS2P54840 703 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 SIK1P57059 783 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 LLGL2Q6P1M3 1020 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 LSRQ86X29 649 aaPredicted RBP9.2□□□□□ -0.94
CNOT1-222ENST00000570139 STRN4Q9NRL3 753 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 INSRP06213 1382 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 DCCP43146 1447 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 EDC4Q6P2E9 1401 aaKnown RBP9.2□□□□□ -0.94
CNOT1-222ENST00000570139 CD163L1Q9NR16 1453 aa9.2□□□□□ -0.94
CNOT1-222ENST00000570139 BMP6P22004 513 aa9.19□□□□□ -0.94
CNOT1-222ENST00000570139 SEPT6Q14141 434 aa9.19□□□□□ -0.94
CNOT1-222ENST00000570139 SULF2Q8IWU5 870 aa9.19□□□□□ -0.94
CNOT1-222ENST00000570139 DDX54Q8TDD1 881 aaKnown RBP9.19□□□□□ -0.94
CNOT1-222ENST00000570139 ZNF669Q96BR6 464 aaPredicted RBP9.19□□□□□ -0.94
CNOT1-222ENST00000570139 PLD4Q96BZ4 506 aa9.19□□□□□ -0.94
CNOT1-222ENST00000570139 RASSF4Q9H2L5 321 aa9.19□□□□□ -0.94
CNOT1-222ENST00000570139 EHMT1Q9H9B1 1298 aa9.19□□□□□ -0.94
CNOT1-222ENST00000570139 KANSL2Q9H9L4 492 aa9.19□□□□□ -0.94
CNOT1-222ENST00000570139 CPSF1Q10570 1443 aaKnown RBP9.19□□□□□ -0.94
CNOT1-222ENST00000570139 LOC100996750A0A140TA64 210 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 B3GALT4O96024 378 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 PCDH1Q08174 1060 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 KIF1AQ12756 1690 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 TCEA2Q15560 299 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 PPP2R5EQ16537 467 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 ST13P5Q8NFI4 369 aaPredicted RBP9.18□□□□□ -0.94
CNOT1-222ENST00000570139 SLC30A3Q99726 388 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 KRTAP4-6Q9BYQ5 205 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 MUC3BQ9H195 1237 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 SLC12A5Q9H2X9 1139 aa9.18□□□□□ -0.94
CNOT1-222ENST00000570139 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
CNOT1-222ENST00000570139 SENP3-EIF4A1A0A087X0R7 540 aa9.17□□□□□ -0.94
CNOT1-222ENST00000570139 FAM177BA6PVY3 158 aa9.17□□□□□ -0.94
CNOT1-222ENST00000570139 BMP1P13497 986 aa9.17□□□□□ -0.94
CNOT1-222ENST00000570139 ZNF157P51786 506 aaPredicted RBP9.17□□□□□ -0.94
CNOT1-222ENST00000570139 RPL6Q02878 288 aaKnown RBP9.17□□□□□ -0.94
CNOT1-222ENST00000570139 CLCQ05315 142 aa9.17□□□□□ -0.94
CNOT1-222ENST00000570139 UBAP2LQ14157 1087 aaKnown RBP9.17□□□□□ -0.94
CNOT1-222ENST00000570139 LRRFIP1Q32MZ4 808 aaKnown RBP9.17□□□□□ -0.94
CNOT1-222ENST00000570139 CBX8Q9HC52 389 aa9.17□□□□□ -0.94
CNOT1-222ENST00000570139 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
CNOT1-222ENST00000570139 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
CNOT1-222ENST00000570139 DDX56Q9NY93 547 aaKnown RBP9.17□□□□□ -0.94
CNOT1-222ENST00000570139 ATXN7L1Q9ULK2 861 aaPredicted RBP9.17□□□□□ -0.94
CNOT1-222ENST00000570139 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 BNIP3LO60238 219 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 MAN1A2O60476 641 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 DDAH1O94760 285 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 ATE1O95260 518 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 S100BP04271 92 aaPredicted RBP9.16□□□□□ -0.94
CNOT1-222ENST00000570139 ARNTP27540 789 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 ATP11AP98196 1134 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 SQSTM1Q13501 440 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 PLEKHG6Q3KR16 790 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 FAM182BQ5T319 152 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 RAB44Q7Z6P3 723 aaPredicted RBP9.16□□□□□ -0.94
CNOT1-222ENST00000570139 RPUSD2Q8IZ73 545 aaKnown RBP9.16□□□□□ -0.94
CNOT1-222ENST00000570139 JMYQ8N9B5 988 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 ZFP42Q96MM3 310 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 TM9SF2Q99805 663 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 IRF2BPLQ9H1B7 796 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 TNKS2Q9H2K2 1166 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 PLAAQ9Y263 795 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 PCDHB14Q9Y5E9 798 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 SLC12A7Q9Y666 1083 aa9.16□□□□□ -0.94
CNOT1-222ENST00000570139 POLR3AO14802 1390 aaPredicted RBP9.15□□□□□ -0.94
CNOT1-222ENST00000570139 KDM2BQ8NHM5 1336 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 GJB6O95452 261 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 THBS1P07996 1170 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 PTPRAP18433 802 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 EIF2AK2P19525 551 aaKnown RBP9.15□□□□□ -0.94
CNOT1-222ENST00000570139 CD33P20138 364 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 AMPD3Q01432 767 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.94
CNOT1-222ENST00000570139 GAL3ST3Q96A11 431 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 POP1Q99575 1024 aaKnown RBP9.15□□□□□ -0.94
CNOT1-222ENST00000570139 PHF24Q9UPV7 400 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 LEMD3Q9Y2U8 911 aa9.15□□□□□ -0.94
CNOT1-222ENST00000570139 J3QW42 95 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 AVPP01185 164 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 MLLT1Q03111 559 aaPredicted RBP9.14□□□□□ -0.95
CNOT1-222ENST00000570139 SSRP1Q08945 709 aaKnown RBP9.14□□□□□ -0.95
CNOT1-222ENST00000570139 RASIP1Q5U651 963 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 CEP135Q66GS9 1140 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 TRIM46Q7Z4K8 759 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 MICALL1Q8N3F8 863 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 PPME1Q9Y570 386 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
CNOT1-222ENST00000570139 USP6P35125 1406 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms