RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	C15orf52	Q6ZUT6	534 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	SDR42E1	Q8WUS8	393 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	FBXW7	Q969H0	707 aa		13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	XPO4	Q9C0E2	1151 aa	Known RBP	13.7	□□□□□ -0.22
SPG7-222	ENST00000569820	KLF18	A0A0U1RQI7	1052 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	TULP1	O00294	542 aa	Predicted RBP	13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	TRIM66	O15016	1216 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	SASH3	O75995	380 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	URI1	O94763	535 aa	Predicted RBP	13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	PRDX5	P30044	214 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	FAM160A1	Q05DH4	1040 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	GOLGA5	Q8TBA6	731 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	CARD6	Q9BX69	1037 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	INCENP	Q9NQS7	918 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	IFNK	Q9P0W0	207 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	SH2B2	O14492	632 aa	Predicted RBP	13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	DYNLL1	P63167	89 aa	Known RBP	13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	AKNAD1	Q5T1N1	836 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	CCDC34	Q96HJ3	373 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	GPR101	Q96P66	508 aa	Predicted RBP	13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	CRAMP1	Q96RY5	1269 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	TMX1	Q9H3N1	280 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	LCMT1	Q9UIC8	334 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	RCOR1	Q9UKL0	485 aa		13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	ANGEL1	Q9UNK9	670 aa	Known RBP	13.69	□□□□□ -0.22
SPG7-222	ENST00000569820	GOLGA8B	A8MQT2	603 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	STAG1	Q8WVM7	1258 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	RGS17	Q9UGC6	210 aa	Predicted RBP	13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	ZRSR1	Q15695	479 aa	Known RBP	13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	SRL	Q86TD4	932 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	NLGN1	Q8N2Q7	840 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	ENGASE	Q8NFI3	743 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	FBXO18	Q8NFZ0	1043 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	CNNM2	Q9H8M5	875 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	JAG2	Q9Y219	1238 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	JRKL	Q9Y4A0	524 aa		13.68	□□□□□ -0.22
SPG7-222	ENST00000569820	BBOX1	O75936	387 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	UFL1	O94874	794 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	PPARA	Q07869	468 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	FSIP1	Q8NA03	581 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	IGDCC4	Q8TDY8	1250 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	ERCC4	Q92889	916 aa	Predicted RBP	13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	EXOC4	Q96A65	974 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	TMEM87B	Q96K49	555 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	SENP2	Q9HC62	589 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	ARFGAP3	Q9NP61	516 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	ANAPC4	Q9UJX5	808 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	QSER1	Q2KHR3	1735 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	ADD1	P35611	737 aa	Known RBP	13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	LMAN1	P49257	510 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	TRIM65	Q6PJ69	517 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	MFSD6	Q6ZSS7	791 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	ZNF804A	Q7Z570	1209 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	BRIP1	Q9BX63	1249 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	PSD3	Q9NYI0	1048 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	ZSWIM5	Q9P217	1185 aa		13.67	□□□□□ -0.22
SPG7-222	ENST00000569820	DLEC1	Q9Y238	1755 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	MYH2	Q9UKX2	1941 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	CDK5RAP2	Q96SN8	1893 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	FDPS	P14324	419 aa	Known RBP	13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	ATP2B4	P23634	1241 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	ME1	P48163	572 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	TMED8	Q6PL24	325 aa	Predicted RBP	13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	RAB11FIP4	Q86YS3	637 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	REXO1L1P	Q8IX06	675 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	GPR161	Q8N6U8	529 aa	Known RBP	13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	FLAD1	Q8NFF5	587 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	SDF4	Q9BRK5	362 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	KRT23	Q9C075	422 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	LY9	Q9HBG7	655 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	GGA1	Q9UJY5	639 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	RRP15	Q9Y3B9	282 aa	Known RBP	13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	PARP3	Q9Y6F1	533 aa		13.66	□□□□□ -0.22
SPG7-222	ENST00000569820	SMIM22	K7EJ46	135 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	PPFIA3	O75145	1194 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	APOA5	Q6Q788	366 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	SGMS1	Q86VZ5	419 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	GPATCH11	Q8N954	259 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	BPIFA3	Q9BQP9	254 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	ADAM21	Q9UKJ8	722 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	NAV1	Q8NEY1	1877 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	GYS2	P54840	703 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	GNL2	Q13823	731 aa	Known RBP	13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	DPCR1	Q3MIW9	517 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	POTEA	Q6S8J7	498 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	CCDC91	Q7Z6B0	441 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	WDR66	Q8TBY9	1149 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	ZNF396	Q96N95	335 aa	Predicted RBP	13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	USP28	Q96RU2	1077 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	EPC1	Q9H2F5	836 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	MED4	Q9NPJ6	270 aa		13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
SPG7-222	ENST00000569820	PPEF1	O14829	653 aa	Predicted RBP	13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	LIFR	P42702	1097 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	TMEM67	Q5HYA8	995 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	IQUB	Q8NA54	791 aa		13.64	□□□□□ -0.23
SPG7-222	ENST00000569820	RNF41	Q9H4P4	317 aa	Predicted RBP	13.64	□□□□□ -0.23

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