RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 MICU3Q86XE3 530 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 MAPKAPK5Q8IW41 473 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 STAG1Q8WVM7 1258 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 AIFM3Q96NN9 605 aa7.3□□□□□ -1.24
CHD9-217ENST00000565832 RTFDC1Q9BY42 306 aaPredicted RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 MKRN1Q9UHC7 482 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 ANGEL1Q9UNK9 670 aaKnown RBP7.3□□□□□ -1.24
CHD9-217ENST00000565832 SPDYE5A6NIY4 337 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 ARHGAP33O14559 1287 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 F13A1P00488 732 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 USP5P45974 858 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 R3HDM1Q15032 1099 aaKnown RBP7.29□□□□□ -1.24
CHD9-217ENST00000565832 DMRTA1Q5VZB9 504 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 STYK1Q6J9G0 422 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 NFXL1Q6ZNB6 911 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 TMC4Q7Z404 712 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 USP48Q86UV5 1035 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 FBXL16Q8N461 479 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 SLC44A5Q8NCS7 719 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 GPT2Q8TD30 523 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 PHKBQ93100 1093 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 CRNKL1Q9BZJ0 848 aaKnown RBP7.29□□□□□ -1.24
CHD9-217ENST00000565832 COA1Q9GZY4 146 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 TMX4Q9H1E5 349 aaPredicted RBP7.29□□□□□ -1.24
CHD9-217ENST00000565832 TFIP11Q9UBB9 837 aaKnown RBP7.29□□□□□ -1.24
CHD9-217ENST00000565832 ZMYM6O95789 1325 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 SWT1Q5T5J6 900 aaKnown RBP7.29□□□□□ -1.24
CHD9-217ENST00000565832 APOA5Q6Q788 366 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 KIAA0825Q8IV33 1275 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 SMARCC2Q8TAQ2 1214 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 RABGEF1Q9UJ41 708 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 ANAPC4Q9UJX5 808 aa7.29□□□□□ -1.24
CHD9-217ENST00000565832 TTF2Q9UNY4 1162 aaKnown RBP7.29□□□□□ -1.24
CHD9-217ENST00000565832 DDX49Q9Y6V7 483 aaKnown RBP7.29□□□□□ -1.24
CHD9-217ENST00000565832 SCN9AQ15858 1988 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
CHD9-217ENST00000565832 RGPD4Q7Z3J3 1758 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 LRRC37AA6NMS7 1700 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 MROH7-TTC4A0A0A0MT08 1334 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 GPR75-ASB3A0A0A6YYF3 556 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 RHBDL3P58872 404 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 PICALMQ13492 652 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 TUSC1Q2TAM9 212 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 FAM184AQ8NB25 1140 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 CNKSR1Q969H4 720 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 KRT23Q9C075 422 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 ATP8A2Q9NTI2 1148 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 FAM205AQ6ZU69 1335 aa7.28□□□□□ -1.24
CHD9-217ENST00000565832 hCG_1642624A0A1W2PR95 340 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 FIBPO43427 364 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 BAG3O95817 575 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 SLC10A3P09131 477 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 GCGRP47871 477 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 METAP2P50579 478 aaKnown RBP eCLIP7.27□□□□□ -1.24
CHD9-217ENST00000565832 CACNB3P54284 484 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 PPP4CP60510 307 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 TMEM259Q4ZIN3 620 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 ENAHQ8N8S7 591 aaPredicted RBP7.27□□□□□ -1.24
CHD9-217ENST00000565832 BANK1Q8NDB2 785 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 NUP133Q8WUM0 1156 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 CNNM2Q9H8M5 875 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 ZNF277Q9NRM2 450 aaPredicted RBP7.27□□□□□ -1.24
CHD9-217ENST00000565832 DAGLAQ9Y4D2 1042 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 SLC12A7Q9Y666 1083 aa7.27□□□□□ -1.24
CHD9-217ENST00000565832 TNKSO95271 1327 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 USP17L3A6NCW0 530 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 USP17L4A6NCW7 530 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 CCDC69A6NI79 296 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 YDJCA8MPS7 323 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 GOLGA6L22H0YM25 854 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 H3BQV1 296 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 CPLX1O14810 134 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 ZBTB43O43298 467 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 RAD21O60216 631 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 ECE2O60344 883 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 GUCY1A2P33402 732 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 GSTO1P78417 241 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 CEBPZQ03701 1054 aaKnown RBP7.27□□□□□ -1.25
CHD9-217ENST00000565832 WTAPQ15007 396 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 SEC23AQ15436 765 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 NTRK3Q16288 839 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 IFFO2Q5TF58 517 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 C12orf60Q5U649 245 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 GIMAP6Q6P9H5 292 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 ZFPM1Q8IX07 1006 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 TEX11Q8IYF3 940 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 TTLL6Q8N841 843 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 ESR2Q92731 530 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 MARVELD3Q96A59 401 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 TMEM87BQ96K49 555 aa7.27□□□□□ -1.25
CHD9-217ENST00000565832 ZSCAN10Q96SZ4 725 aaPredicted RBP7.27□□□□□ -1.25
CHD9-217ENST00000565832 LLPHQ9BRT6 129 aaKnown RBP7.27□□□□□ -1.25
CHD9-217ENST00000565832 FTOQ9C0B1 505 aaKnown RBP eCLIP7.27□□□□□ -1.25
CHD9-217ENST00000565832 RNF41Q9H4P4 317 aaPredicted RBP7.27□□□□□ -1.25
CHD9-217ENST00000565832 DDX4Q9NQI0 724 aaKnown RBP7.27□□□□□ -1.25
CHD9-217ENST00000565832 LILRB3O75022 631 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 POLR3DP05423 398 aaPredicted RBP7.26□□□□□ -1.25
CHD9-217ENST00000565832 LDHCP07864 332 aa7.26□□□□□ -1.25
CHD9-217ENST00000565832 FGRP09769 529 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms