RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 LDLRAD1Q5T700 205 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 GTF3C2Q8WUA4 911 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 FRAT1Q92837 279 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 ARHGAP9Q9BRR9 750 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 IQSEC3Q9UPP2 1182 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 DOLKQ9UPQ8 538 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
HNRNPC-228ENST00000557033 CLRN2A0PK11 232 aa12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 CDK11BP21127 795 aaKnown RBP12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 CHAF1AQ13111 956 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 ZKSCAN2Q63HK3 967 aa12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 ZSCAN29Q8IWY8 852 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 WDR66Q8TBY9 1149 aa12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 SIL1Q9H173 461 aa12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 VEZTQ9HBM0 779 aa12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 GNL3LQ9NVN8 582 aaKnown RBP12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 RNF186Q9NXI6 227 aa12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 ZNF70Q9UC06 446 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
HNRNPC-228ENST00000557033 MAST3O60307 1309 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 GNAI2P04899 355 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 TM4SF4P48230 202 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 TNNI2P48788 182 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 RASA3Q14644 834 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 ATP2B3Q16720 1220 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 TEKT1Q969V4 418 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 LRCH3Q96II8 777 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 TDRD3Q9H7E2 651 aaKnown RBP12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 SEPT3Q9UH03 358 aa12.14□□□□□ -0.47
HNRNPC-228ENST00000557033 AKAP11Q9UKA4 1901 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 NR1I2O75469 434 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 TRPA1O75762 1119 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 INHBEP58166 350 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 PRKG1Q13976 671 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 GRIK5Q16478 980 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 OXLD1Q5BKU9 147 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 NBPF12Q5TAG4 269 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 ZBTB33Q86T24 672 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 AKAP2Q9Y2D5 859 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 PCDHGA11Q9Y5H2 935 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 DNMT3AQ9Y6K1 912 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 ARAP2Q8WZ64 1704 aa12.13□□□□□ -0.47
HNRNPC-228ENST00000557033 AOX1Q06278 1338 aa12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 USP2O75604 605 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 DXOO77932 396 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 SREBF2Q12772 1141 aa12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 FKBP1CQ5VVH2 108 aa12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 TPCN2Q8NHX9 752 aa12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 DENND2AQ9ULE3 1009 aa12.12□□□□□ -0.47
HNRNPC-228ENST00000557033 TIMM10P62072 90 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 MSS51Q4VC12 460 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 FAM83AQ86UY5 434 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 ANKRD13AQ8IZ07 590 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 TMEM57Q8N5G2 664 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 HINFPQ9BQA5 517 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
HNRNPC-228ENST00000557033 MANSC4A6NHS7 340 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 TCP10L2B9ZVM9 353 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 ZBTB48P10074 688 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 NAALADL2Q58DX5 795 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 APOBEC3HQ6NTF7 200 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 SH3BP5LQ7L8J4 393 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 TMOD2Q9NZR1 351 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 TNNQ9UQP3 1299 aa12.1□□□□□ -0.47
HNRNPC-228ENST00000557033 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 A0A1B0GUL7 405 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 ALDH1A1P00352 501 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 LDHBP07195 334 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 WEE1P30291 646 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 PBX2P40425 430 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 PHKA1P46020 1223 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 MMP16P51512 607 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 TFCP2Q12800 502 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 MVPQ14764 893 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 FAM160A2Q8N612 972 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 CFHR5Q9BXR6 569 aa12.09□□□□□ -0.47
HNRNPC-228ENST00000557033 FZD1Q9UP38 647 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms