RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 SHHQ15465 462 aa14.37□□□□□ -0.11
HNRNPC-206ENST00000553444 TRPV1Q8NER1 839 aa14.37□□□□□ -0.11
HNRNPC-206ENST00000553444 MAFAQ8NHW3 353 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-206ENST00000553444 CDCA7LQ96GN5 454 aa14.37□□□□□ -0.11
HNRNPC-206ENST00000553444 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
HNRNPC-206ENST00000553444 HLA-DOAP06340 250 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 CYP2C19P33261 490 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 ATP2B2Q01814 1243 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 C9orf50Q5SZB4 431 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 WDR78Q5VTH9 848 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 LBX2Q6XYB7 198 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 NPLOC4Q8TAT6 608 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 FEZ1Q99689 392 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 SNRKQ9NRH2 765 aa14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
HNRNPC-206ENST00000553444 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 CYBAP13498 195 aa14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 VCAM1P19320 739 aa14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 CNGA1P29973 690 aa14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 ZYXQ15942 572 aaKnown RBP14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 TRMT2AQ8IZ69 625 aaKnown RBP14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 TTYH1Q9H313 450 aaPredicted RBP14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 PRDM6Q9NQX0 595 aa14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 BTBD7Q9P203 1132 aa14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 ATP11BQ9Y2G3 1177 aa14.35□□□□□ -0.11
HNRNPC-206ENST00000553444 SPDYE16A6NNV3 312 aaPredicted RBP14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 CYP2E1P05181 493 aaPredicted RBP14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 USP14P54578 494 aa14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 SMAD3P84022 425 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 GJC2Q5T442 439 aaPredicted RBP14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 SLC39A5Q6ZMH5 540 aa14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 KIAA1683Q9H0B3 1180 aa14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 IVNS1ABPQ9Y6Y0 642 aa14.34□□□□□ -0.11
HNRNPC-206ENST00000553444 PNMA6EA0A0J9YXQ4 647 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 IGSF3O75054 1194 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 DYNLL1P63167 89 aaKnown RBP14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 G3BP1Q13283 466 aaKnown RBP eCLIP14.33□□□□□ -0.124e-10■□□□□ 8.8
HNRNPC-206ENST00000553444 SNX17Q15036 470 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 TRIM60Q495X7 471 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 ACER1Q8TDN7 264 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 MYLIPQ8WY64 445 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 BADQ92934 168 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 DBNDD2Q9BQY9 259 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 PIH1D3Q9NQM4 214 aaKnown RBP14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 PRDM5Q9NQX1 630 aaPredicted RBP14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 PDLIM7Q9NR12 457 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 EYSQ5T1H1 3165 aa14.33□□□□□ -0.12
HNRNPC-206ENST00000553444 RAB3GAP1Q15042 981 aa14.32□□□□□ -0.12
HNRNPC-206ENST00000553444 TTC39AQ5SRH9 613 aa14.32□□□□□ -0.12
HNRNPC-206ENST00000553444 OLFML2BQ68BL8 750 aa14.32□□□□□ -0.12
HNRNPC-206ENST00000553444 ARRDC4Q8NCT1 418 aa14.32□□□□□ -0.12
HNRNPC-206ENST00000553444 ARHGAP45Q92619 1136 aa14.32□□□□□ -0.12
HNRNPC-206ENST00000553444 EHD4Q9H223 541 aa14.32□□□□□ -0.12
HNRNPC-206ENST00000553444 GPR108Q9NPR9 543 aa14.32□□□□□ -0.12
HNRNPC-206ENST00000553444 SIPA1L1O43166 1804 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 CDH23Q9H251 3354 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 TRIM43BA6NCK2 446 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 KBTBD13C9JR72 458 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 GNAI2P04899 355 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 FOSL2P15408 326 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 ADORA2AP29274 412 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 ZAP70P43403 619 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 RARSP54136 660 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 CCDC158Q5M9N0 1113 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 SH3RF1Q7Z6J0 888 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 TRIM43Q96BQ3 446 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 ZNF512BQ96KM6 892 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 RPAP3Q9H6T3 665 aaPredicted RBP14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 SERPINB13Q9UIV8 391 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 PRUNE2Q8WUY3 3088 aa14.31□□□□□ -0.12
HNRNPC-206ENST00000553444 DNAH12Q6ZR08 3092 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 SEPT4O43236 478 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 CYP7A1P22680 504 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 GUCY1A2P33402 732 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 ABCB5Q2M3G0 1257 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 CERKLQ49MI3 558 aaPredicted RBP14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 C1orf53Q5VUE5 145 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 ANO1Q5XXA6 986 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 DPP9Q86TI2 863 aa14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 MOV10L1Q9BXT6 1211 aaKnown RBP14.3□□□□□ -0.12
HNRNPC-206ENST00000553444 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 STRNO43815 780 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 COBLO75128 1261 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 SHMT1P34896 483 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 USP5P45974 858 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 LRRC41Q15345 812 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 MAST2Q6P0Q8 1798 aa14.29□□□□□ -0.12
HNRNPC-206ENST00000553444 ERCC3P19447 782 aa14.28□□□□□ -0.12
HNRNPC-206ENST00000553444 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
HNRNPC-206ENST00000553444 FAM47AQ5JRC9 791 aa14.28□□□□□ -0.12
HNRNPC-206ENST00000553444 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
HNRNPC-206ENST00000553444 CERS3Q8IU89 383 aa14.28□□□□□ -0.12
HNRNPC-206ENST00000553444 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
HNRNPC-206ENST00000553444 SYMPKQ92797 1274 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms