RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 OTUD7AQ8TE49 926 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 PUS7LQ9H0K6 701 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 CABP5Q9NP86 173 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 ZBTB21Q9ULJ3 1066 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 SLC4A4Q9Y6R1 1079 aa11.71□□□□□ -0.53
TNFRSF1A-214ENST00000543048 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ADGRA2Q96PE1 1338 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GH2P01242 217 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 BCRP11274 1271 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 HOXD10P28358 340 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SHMT1P34896 483 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 PSMC4P43686 418 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GABPAQ06546 454 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ABCB5Q2M3G0 1257 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SHROOM1Q2M3G4 852 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 TREML2Q5T2D2 321 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 AMOTL1Q8IY63 956 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SLC39A7Q92504 469 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 STRBPQ96SI9 672 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
TNFRSF1A-214ENST00000543048 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L12C9JPN9 530 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L21D6R901 530 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CYP2D6P10635 497 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 PRMT2P55345 433 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 MTMR2Q13614 643 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 C12orf60Q5U649 245 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SMCR8Q8TEV9 937 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 APPBP2Q92624 585 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ARHGAP39Q9C0H5 1083 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 IGHDP01880 384 aa11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GCLCP48506 637 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GIMAP6Q6P9H5 292 aa11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SMC5Q8IY18 1101 aa11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GNAT2P19087 354 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CTGFP29279 349 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CDK8P49336 464 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP14P54578 494 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 PDE1AP54750 535 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 FCGRTP55899 365 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SOX10P56693 466 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 B4GALNT3Q6L9W6 998 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CTR9Q6PD62 1173 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 P2RX7Q99572 595 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 FSD1Q9BTV5 496 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ASCC2Q9H1I8 757 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SRRDQ9UH36 339 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 PTCH2Q9Y6C5 1203 aa11.67□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CYP2D7A0A087X1C5 515 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 GPAA1O43292 621 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 C7P10643 843 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 IRX3P78415 501 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 MLLT1Q03111 559 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SEPT2Q15019 361 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ACER1Q8TDN7 264 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ARMC5Q96C12 935 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 EVI5LQ96CN4 794 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 FEZ1Q99689 392 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 LNPKQ9C0E8 428 aa11.66□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CENPFP49454 3210 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ZNFX1Q9P2E3 1918 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 MINDY4BA8MYZ0 360 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L15C9J2P7 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L13C9JLJ4 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L11C9JVI0 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L18D6R9N7 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L22D6RA61 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L17D6RBQ6 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L19D6RCP7 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L20D6RJB6 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 M0R2C6 588 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 APPP05067 770 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 USP17L24Q0WX57 530 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 FAM110CQ1W6H9 321 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SLC9C1Q4G0N8 1177 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms