RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 C1orf229Q6ZS94 237 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-207ENST00000537965 TTLL7Q6ZT98 887 aa6.96□□□□□ -1.3
SNHG1-207ENST00000537965 DDX46Q7L014 1031 aaKnown RBP6.96□□□□□ -1.3
SNHG1-207ENST00000537965 SAPCD2Q86UD0 394 aa6.96□□□□□ -1.3
SNHG1-207ENST00000537965 GOLGA6L1Q8N7Z2 621 aa6.96□□□□□ -1.3
SNHG1-207ENST00000537965 MAPK8IP3Q9UPT6 1336 aa6.96□□□□□ -1.3
SNHG1-207ENST00000537965 ABCC12Q96J65 1359 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 TRAF5O00463 557 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 LGR5O75473 907 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 ARAFP10398 606 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 CD33P20138 364 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 WEE1P30291 646 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 GSK3AP49840 483 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 LMOD3Q0VAK6 560 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 KIAA2012Q0VF49 1180 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
SNHG1-207ENST00000537965 NFE2L2Q16236 605 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 ALDH16A1Q8IZ83 802 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 DPF2Q92785 391 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 MARK1Q9P0L2 795 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 ANKIB1Q9P2G1 1089 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 SERPINA10Q9UK55 444 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 NOVA2Q9UNW9 492 aaKnown RBP6.95□□□□□ -1.3
SNHG1-207ENST00000537965 DDX60Q8IY21 1712 aaKnown RBP6.95□□□□□ -1.3
SNHG1-207ENST00000537965 UBN2Q6ZU65 1347 aa6.95□□□□□ -1.3
SNHG1-207ENST00000537965 COL4A5P29400 1685 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 HSP90B1P14625 803 aaKnown RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 RPS12P25398 132 aaKnown RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 GMPSP49915 693 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 GRAPQ13588 217 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 C2orf69Q8N8R5 385 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 GALNT6Q8NCL4 622 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 NEDD1Q8NHV4 660 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 GRAPLQ8TC17 118 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 EDARADDQ8WWZ3 215 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 SCARF2Q96GP6 870 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 SUSD3Q96L08 255 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 AVENQ9NQS1 362 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 CNOT7Q9UIV1 285 aaKnown RBP6.94□□□□□ -1.3
SNHG1-207ENST00000537965 TSPYL4Q9UJ04 414 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 GGA1Q9UJY5 639 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 ABCC4O15439 1325 aa6.94□□□□□ -1.3
SNHG1-207ENST00000537965 PSME4Q14997 1843 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 AOC2O75106 756 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 RAD17O75943 681 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 EIF2S2P20042 333 aaKnown RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 HUNKP57058 714 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 FMR1Q06787 632 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 TCIRG1Q13488 830 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 DGKZQ13574 1117 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 HIF1AQ16665 826 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 SLCO4C1Q6ZQN7 724 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 ZNF280CQ8ND82 737 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 DCPSQ96C86 337 aaKnown RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 CCDC97Q96F63 343 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 PLEKHF1Q96S99 279 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 EYA3Q99504 573 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 GLIS2Q9BZE0 524 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 MCOLN1Q9GZU1 580 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 ZNF408Q9H9D4 720 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 TRMT112Q9UI30 125 aaKnown RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 DNMT3AQ9Y6K1 912 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 SH3TC1Q8TE82 1336 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 CACNA1FO60840 1977 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 TNRC18O15417 2968 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-207ENST00000537965 LRRC37AA6NMS7 1700 aa6.93□□□□□ -1.3
SNHG1-207ENST00000537965 MYH3P11055 1940 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 SHISA8B8ZZ34 492 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 ATG7O95352 703 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 RTN1Q16799 776 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 SWI5Q1ZZU3 235 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 COPS6Q7L5N1 327 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 KRT26Q7Z3Y9 468 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 NLRP10Q86W26 655 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 HSH2DQ96JZ2 352 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 SAGE1Q9NXZ1 904 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 KLF15Q9UIH9 416 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 ZMIZ1Q9ULJ6 1067 aa6.92□□□□□ -1.3
SNHG1-207ENST00000537965 NEURL1BA8MQ27 555 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 EPXP11678 715 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 HCLS1P14317 486 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-207ENST00000537965 ADH6P28332 368 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 RIPK4P57078 832 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
SNHG1-207ENST00000537965 AIMP1Q12904 312 aaKnown RBP6.91□□□□□ -1.3
SNHG1-207ENST00000537965 ZNF468Q5VIY5 522 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-207ENST00000537965 RGMBQ6NW40 437 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 USP48Q86UV5 1035 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 BEND7Q8N7W2 519 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-207ENST00000537965 PBXIP1Q96AQ6 731 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 CEP63Q96MT8 703 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 THUMPD2Q9BTF0 503 aaKnown RBP6.91□□□□□ -1.3
SNHG1-207ENST00000537965 GBA2Q9HCG7 927 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-207ENST00000537965 BRD7Q9NPI1 651 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 PRR12Q9ULL5 1215 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 SCN9AQ15858 1988 aa6.91□□□□□ -1.3
SNHG1-207ENST00000537965 PSMD14O00487 310 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 ZNF157P51786 506 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms