RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 NOL10Q9BSC4 688 aaKnown RBP25.3■■□□□ 1.64
PKP3-205ENST00000527442 AATFQ9NY61 560 aaKnown RBP eCLIP25.3■■□□□ 1.648e-9■■■□□ 14.8
PKP3-205ENST00000527442 TMOD4Q9NZQ9 345 aa25.3■■□□□ 1.64
PKP3-205ENST00000527442 CUL9Q8IWT3 2517 aa25.3■■□□□ 1.64
PKP3-205ENST00000527442 XRCC5P13010 732 aaKnown RBP25.29■■□□□ 1.64
PKP3-205ENST00000527442 LRIT3Q3SXY7 679 aa25.29■■□□□ 1.64
PKP3-205ENST00000527442 MAPKAPK5Q8IW41 473 aa25.29■■□□□ 1.64
PKP3-205ENST00000527442 TDHQ8IZJ6 230 aa25.29■■□□□ 1.64
PKP3-205ENST00000527442 GPRC5AQ8NFJ5 357 aa25.29■■□□□ 1.64
PKP3-205ENST00000527442 PI4K2BQ8TCG2 481 aa25.29■■□□□ 1.64
PKP3-205ENST00000527442 DHX36Q9H2U1 1008 aaKnown RBP25.29■■□□□ 1.64
PKP3-205ENST00000527442 A0A0C4DFX4 3053 aa25.28■■□□□ 1.64
PKP3-205ENST00000527442 GDF11O95390 407 aa25.28■■□□□ 1.64
PKP3-205ENST00000527442 UQCRFS1P1P0C7P4 283 aa25.28■■□□□ 1.64
PKP3-205ENST00000527442 TTC22Q5TAA0 569 aa25.28■■□□□ 1.64
PKP3-205ENST00000527442 SNRKQ9NRH2 765 aa25.28■■□□□ 1.64
PKP3-205ENST00000527442 RBPJLQ9UBG7 517 aa25.28■■□□□ 1.64
PKP3-205ENST00000527442 FLT1P17948 1338 aa25.28■■□□□ 1.64
PKP3-205ENST00000527442 MYH1P12882 1939 aa25.27■■□□□ 1.64
PKP3-205ENST00000527442 ERC2O15083 957 aa25.27■■□□□ 1.64
PKP3-205ENST00000527442 GLRX3O76003 335 aaKnown RBP25.27■■□□□ 1.64
PKP3-205ENST00000527442 COL6A1P12109 1028 aa25.27■■□□□ 1.64
PKP3-205ENST00000527442 ZKSCAN1P17029 563 aaPredicted RBP25.27■■□□□ 1.64
PKP3-205ENST00000527442 CACNB2Q08289 660 aaPredicted RBP25.27■■□□□ 1.64
PKP3-205ENST00000527442 NAA16Q6N069 864 aaPredicted RBP25.27■■□□□ 1.64
PKP3-205ENST00000527442 ADGRA1Q86SQ6 560 aa25.27■■□□□ 1.64
PKP3-205ENST00000527442 TGFBRAP1Q8WUH2 860 aa25.27■■□□□ 1.64
PKP3-205ENST00000527442 USP6NLQ92738 828 aa25.27■■□□□ 1.64
PKP3-205ENST00000527442 UBE2OQ9C0C9 1292 aaKnown RBP25.27■■□□□ 1.64
PKP3-205ENST00000527442 PORCNQ9H237 461 aa25.27■■□□□ 1.64
PKP3-205ENST00000527442 C19orf81C9J6K1 198 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 USP17L10C9JJH3 530 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 ATP5JP18859 108 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 CCND3P30281 292 aaPredicted RBP25.26■■□□□ 1.63
PKP3-205ENST00000527442 CCL14Q16627 93 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 Q3C1V9 767 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 BMP2KLQ5H9B9 411 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 TSHZ3Q63HK5 1081 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 POTEEQ6S8J3 1075 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 METTL16Q86W50 562 aaKnown RBP25.26■■□□□ 1.63
PKP3-205ENST00000527442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.26■■□□□ 1.63
PKP3-205ENST00000527442 ZNF512BQ96KM6 892 aaPredicted RBP25.26■■□□□ 1.63
PKP3-205ENST00000527442 ZBTB21Q9ULJ3 1066 aa25.26■■□□□ 1.63
PKP3-205ENST00000527442 BAG3O95817 575 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 GSPT1P15170 499 aaKnown RBP25.25■■□□□ 1.63
PKP3-205ENST00000527442 MAPK4P31152 587 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 ERVK-9P63128 1117 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 ERVK-24P63145 666 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 CCDC158Q5M9N0 1113 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 CRACR2BQ8N4Y2 399 aaPredicted RBP25.25■■□□□ 1.63
PKP3-205ENST00000527442 PAGR1Q9BTK6 254 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 MTMR10Q9NXD2 777 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 PALD1Q9ULE6 856 aa25.25■■□□□ 1.63
PKP3-205ENST00000527442 PLCG2P16885 1265 aa25.24■■□□□ 1.63
PKP3-205ENST00000527442 PPP4CP60510 307 aa25.24■■□□□ 1.63
PKP3-205ENST00000527442 MORN1Q5T089 497 aa25.24■■□□□ 1.63
PKP3-205ENST00000527442 LHX8Q68G74 356 aa25.24■■□□□ 1.63
PKP3-205ENST00000527442 GPR142Q7Z601 462 aa25.24■■□□□ 1.63
PKP3-205ENST00000527442 TRMT44Q8IYL2 757 aaKnown RBP25.24■■□□□ 1.63
PKP3-205ENST00000527442 STXBP5LQ9Y2K9 1186 aa25.24■■□□□ 1.63
PKP3-205ENST00000527442 RGS2P41220 211 aa25.23■■□□□ 1.63
PKP3-205ENST00000527442 LRRC26Q2I0M4 334 aa25.23■■□□□ 1.63
PKP3-205ENST00000527442 FOXP4Q8IVH2 680 aaPredicted RBP25.23■■□□□ 1.63
PKP3-205ENST00000527442 APBA2Q99767 749 aa25.23■■□□□ 1.63
PKP3-205ENST00000527442 TRIM34Q9BYJ4 488 aa25.23■■□□□ 1.63
PKP3-205ENST00000527442 EMILIN3Q9NT22 766 aa25.23■■□□□ 1.63
PKP3-205ENST00000527442 SAP30BPQ9UHR5 308 aaKnown RBP25.23■■□□□ 1.63
PKP3-205ENST00000527442 TTC39AQ5SRH9 613 aa25.22■■□□□ 1.63
PKP3-205ENST00000527442 GINM1Q9NU53 330 aa25.22■■□□□ 1.63
PKP3-205ENST00000527442 CYP2E1P05181 493 aaPredicted RBP25.21■■□□□ 1.63
PKP3-205ENST00000527442 PLEKHH3Q7Z736 793 aa25.21■■□□□ 1.63
PKP3-205ENST00000527442 CCAR1Q8IX12 1150 aaKnown RBP25.21■■□□□ 1.63
PKP3-205ENST00000527442 GTF3C2Q8WUA4 911 aaPredicted RBP25.2■■□□□ 1.62
PKP3-205ENST00000527442 DYNLL1P63167 89 aaKnown RBP25.19■■□□□ 1.62
PKP3-205ENST00000527442 MDM2Q00987 491 aaPredicted RBP25.19■■□□□ 1.62
PKP3-205ENST00000527442 USP17L2Q6R6M4 530 aa25.19■■□□□ 1.62
PKP3-205ENST00000527442 HAUS7Q99871 368 aa25.19■■□□□ 1.62
PKP3-205ENST00000527442 PIH1D3Q9NQM4 214 aaKnown RBP25.19■■□□□ 1.62
PKP3-205ENST00000527442 LTBP2Q14767 1821 aa25.19■■□□□ 1.62
PKP3-205ENST00000527442 CNMDO75829 334 aa25.18■■□□□ 1.62
PKP3-205ENST00000527442 GH2P01242 217 aa25.18■■□□□ 1.62
PKP3-205ENST00000527442 HLA-DOAP06340 250 aa25.18■■□□□ 1.62
PKP3-205ENST00000527442 MAP2K5Q13163 448 aa25.18■■□□□ 1.62
PKP3-205ENST00000527442 ZYXQ15942 572 aaKnown RBP25.18■■□□□ 1.62
PKP3-205ENST00000527442 DNAH12Q6ZR08 3092 aa25.17■■□□□ 1.62
PKP3-205ENST00000527442 ZAP70P43403 619 aa25.17■■□□□ 1.62
PKP3-205ENST00000527442 C12orf42Q96LP6 360 aa25.17■■□□□ 1.62
PKP3-205ENST00000527442 BOLA2Q9H3K6 86 aa25.17■■□□□ 1.62
PKP3-205ENST00000527442 FLRT1Q9NZU1 646 aa25.17■■□□□ 1.62
PKP3-205ENST00000527442 NDUFB9Q9Y6M9 179 aa25.17■■□□□ 1.62
PKP3-205ENST00000527442 CWC22Q9HCG8 908 aaKnown RBP25.16■■□□□ 1.62
PKP3-205ENST00000527442 RABGAP1Q9Y3P9 1069 aa25.16■■□□□ 1.62
PKP3-205ENST00000527442 MYH7P12883 1935 aa25.16■■□□□ 1.62
PKP3-205ENST00000527442 UNC80Q8N2C7 3258 aa25.15■■□□□ 1.62
PKP3-205ENST00000527442 SDSP20132 328 aa25.15■■□□□ 1.62
PKP3-205ENST00000527442 FEZ1Q99689 392 aa25.15■■□□□ 1.62
PKP3-205ENST00000527442 USP17L15C9J2P7 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 USP17L13C9JLJ4 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 USP17L11C9JVI0 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 USP17L18D6R9N7 530 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms