RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 ZNF214Q9UL59 606 aaPredicted RBP8.73□□□□□ -1.01
NPHP3-211ENST00000515289 TACC3Q9Y6A5 838 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 SNCAIPQ9Y6H5 919 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 FGD6Q6ZV73 1430 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 ZBTB42B2RXF5 422 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 GDF9O60383 454 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 THBS1P07996 1170 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 GSTP1P09211 210 aaKnown RBP8.72□□□□□ -1.01
NPHP3-211ENST00000515289 NAT2P11245 290 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 POU3F2P20265 443 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-211ENST00000515289 CDK8P49336 464 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 UBAP2LQ14157 1087 aaKnown RBP8.72□□□□□ -1.01
NPHP3-211ENST00000515289 HSP90AA2PQ14568 343 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-211ENST00000515289 DHCR24Q15392 516 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
NPHP3-211ENST00000515289 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 TCEAL8Q8IYN2 117 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 CHMP4CQ96CF2 233 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 CHST12Q9NRB3 414 aa8.72□□□□□ -1.01
NPHP3-211ENST00000515289 SOS2Q07890 1332 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-211ENST00000515289 FAM83GA6ND36 823 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 GPR39O43194 453 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 SH3BP5O60239 455 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 ESRRAP11474 423 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-211ENST00000515289 PTPRAP18433 802 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 NEUROD1Q13562 356 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 PCSK7Q16549 785 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 GNPTABQ3T906 1256 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 WIPI1Q5MNZ9 446 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-211ENST00000515289 TMEM201Q5SNT2 666 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 CEP135Q66GS9 1140 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 LEO1Q8WVC0 666 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-211ENST00000515289 MTMR8Q96EF0 704 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 AARSD1Q9BTE6 412 aaKnown RBP8.71□□□□□ -1.02
NPHP3-211ENST00000515289 ADAM19Q9H013 955 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 BCCIPQ9P287 314 aaKnown RBP eCLIP8.71□□□□□ -1.02
NPHP3-211ENST00000515289 CORINQ9Y5Q5 1042 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 CHD1O14646 1710 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 MYOM3Q5VTT5 1437 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 CARMIL2Q6F5E8 1435 aa8.71□□□□□ -1.02
NPHP3-211ENST00000515289 ABCA8O94911 1581 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 SHROOM2Q13796 1616 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 IFRD1O00458 451 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 BRINP1O60477 761 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 SUMO1P63165 101 aaKnown RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 MLLT1Q03111 559 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 ITKQ08881 620 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 STRN3Q13033 797 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 DHX8Q14562 1220 aaKnown RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 SV2CQ496J9 727 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 TRIM61Q5EBN2 209 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 FAM102BQ5T8I3 360 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 YOD1Q5VVQ6 348 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 HFE2Q6ZVN8 426 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 RAB44Q7Z6P3 723 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 C11orf96Q7Z7L8 435 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 PASD1Q8IV76 773 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 SMAD5Q99717 465 aaKnown RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 MAF1Q9H063 256 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 PUS7LQ9H0K6 701 aaKnown RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 NDFIP2Q9NV92 336 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 PCDHA4Q9UN74 947 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 SUPT6HQ7KZ85 1726 aaKnown RBP8.7□□□□□ -1.02
NPHP3-211ENST00000515289 PLB1Q6P1J6 1458 aa8.7□□□□□ -1.02
NPHP3-211ENST00000515289 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 FIGNL2A6NMB9 653 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 DNAJA2O60884 412 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 DNAJC8O75937 253 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-211ENST00000515289 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 PLCG1P19174 1290 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 HSP90AB4PQ58FF6 505 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 HDXQ7Z353 690 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 PNISRQ8TF01 805 aaKnown RBP8.69□□□□□ -1.02
NPHP3-211ENST00000515289 FBXO41Q8TF61 875 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 PLPPR2Q96GM1 343 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 RTFDC1Q9BY42 306 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-211ENST00000515289 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 SFMBT1Q9UHJ3 866 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 SPEF1Q9Y4P9 236 aa8.69□□□□□ -1.02
NPHP3-211ENST00000515289 DHX57Q6P158 1386 aaKnown RBP8.69□□□□□ -1.02
NPHP3-211ENST00000515289 TCOF1Q13428 1488 aaKnown RBP8.69□□□□□ -1.02
NPHP3-211ENST00000515289 ANKRD34BA5PLL1 514 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 FGFR1P11362 822 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 PDE4BQ07343 736 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 STAT4Q14765 748 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 LRFN4Q6PJG9 635 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 LHFPL2Q6ZUX7 228 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 ZBTB46Q86UZ6 589 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 SPATS2Q86XZ4 545 aaKnown RBP8.68□□□□□ -1.02
NPHP3-211ENST00000515289 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 GPBAR1Q8TDU6 330 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 AASDHPPTQ9NRN7 309 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 PRG4Q92954 1404 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-211ENST00000515289 CLASP1Q7Z460 1538 aa8.68□□□□□ -1.02
NPHP3-211ENST00000515289 BNIP3LO60238 219 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms