RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 WAPLQ7Z5K2 1190 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 PDZD3Q86UT5 571 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 CACTIN-AS1Q8N1I8 211 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 PMFBP1Q8TBY8 1022 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 MIR1-1HGQ9H1L0 117 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 OSBPL2Q9H1P3 480 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 SH2B1Q9NRF2 756 aaPredicted RBP9.52□□□□□ -0.89
RFC1-213ENST00000512275 GGA1Q9UJY5 639 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 STARD13Q9Y3M8 1113 aa9.52□□□□□ -0.89
RFC1-213ENST00000512275 ADGRB2O60241 1585 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 PTCH1Q13635 1447 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 FAM135BQ49AJ0 1406 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 ARNTP27540 789 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 CDC27P30260 824 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 SERINC3Q13530 473 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 SLCO4C1Q6ZQN7 724 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 GOLGA6L1Q8N7Z2 621 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 FBXO27Q8NI29 283 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 EDARADDQ8WWZ3 215 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 NKD1Q969G9 470 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 PIF1Q9H611 641 aa9.51□□□□□ -0.89
RFC1-213ENST00000512275 PIK3R4Q99570 1358 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
RFC1-213ENST00000512275 H3BRJ5 948 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 MSTNO14793 375 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 CILPO75339 1184 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 SEPT6Q14141 434 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 IKBKEQ14164 716 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 MPP2Q14168 576 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 LRRC14Q15048 493 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 SCARA3Q6AZY7 606 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 LLGL2Q6P1M3 1020 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 SOX17Q9H6I2 414 aaPredicted RBP9.5□□□□□ -0.89
RFC1-213ENST00000512275 CACNA2D2Q9NY47 1150 aa9.5□□□□□ -0.89
RFC1-213ENST00000512275 ITSN1Q15811 1721 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 SOX1O00570 391 aaPredicted RBP9.49□□□□□ -0.89
RFC1-213ENST00000512275 KCNA6P17658 529 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 ETFBP38117 255 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 BAG6P46379 1132 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 GRIN3AQ8TCU5 1115 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 EMILIN2Q9BXX0 1053 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 MKL2Q9ULH7 1088 aa9.49□□□□□ -0.89
RFC1-213ENST00000512275 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
RFC1-213ENST00000512275 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
RFC1-213ENST00000512275 XIRP1Q702N8 1843 aaKnown RBP9.48□□□□□ -0.89
RFC1-213ENST00000512275 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
RFC1-213ENST00000512275 SEZ6Q53EL9 994 aa9.48□□□□□ -0.89
RFC1-213ENST00000512275 GDF6Q6KF10 455 aaPredicted RBP9.48□□□□□ -0.89
RFC1-213ENST00000512275 SHDQ96IW2 340 aa9.48□□□□□ -0.89
RFC1-213ENST00000512275 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
RFC1-213ENST00000512275 RRAGCQ9HB90 399 aa9.48□□□□□ -0.89
RFC1-213ENST00000512275 EVC2Q86UK5 1308 aa9.48□□□□□ -0.89
RFC1-213ENST00000512275 USP32Q8NFA0 1604 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 TLR3O15455 904 aaKnown RBP9.47□□□□□ -0.89
RFC1-213ENST00000512275 KLF4O43474 513 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 RGS9O75916 674 aaPredicted RBP9.47□□□□□ -0.89
RFC1-213ENST00000512275 EPXP11678 715 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 LMNB1P20700 586 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 CABP4P57796 275 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 AP3B2Q13367 1082 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 CWF19L2Q2TBE0 894 aaKnown RBP9.47□□□□□ -0.89
RFC1-213ENST00000512275 REC114Q7Z4M0 266 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 SRRTQ9BXP5 876 aaKnown RBP9.47□□□□□ -0.89
RFC1-213ENST00000512275 NRSN2Q9GZP1 204 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 PPT2Q9UMR5 302 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 MRVI1Q9Y6F6 885 aa9.47□□□□□ -0.89
RFC1-213ENST00000512275 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
RFC1-213ENST00000512275 PROCP04070 461 aa9.46□□□□□ -0.9
RFC1-213ENST00000512275 ALAS2P22557 587 aa9.46□□□□□ -0.9
RFC1-213ENST00000512275 PTPN11Q06124 597 aaPredicted RBP9.46□□□□□ -0.9
RFC1-213ENST00000512275 HGSNATQ68CP4 663 aa9.46□□□□□ -0.9
RFC1-213ENST00000512275 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
RFC1-213ENST00000512275 DDX54Q8TDD1 881 aaKnown RBP9.46□□□□□ -0.9
RFC1-213ENST00000512275 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
RFC1-213ENST00000512275 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
RFC1-213ENST00000512275 CDC42BPGQ6DT37 1551 aa9.46□□□□□ -0.9
RFC1-213ENST00000512275 AKAP12Q02952 1782 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 FAM177BA6PVY3 158 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 TRIM37O94972 964 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 ALBP02768 609 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
RFC1-213ENST00000512275 HOXB4P17483 251 aaPredicted RBP9.45□□□□□ -0.9
RFC1-213ENST00000512275 AMPD1P23109 780 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 PIP4K2BP78356 416 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 ANKS3Q6ZW76 656 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 WNT8BQ93098 351 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 PRKAG3Q9UGI9 489 aa9.45□□□□□ -0.9
RFC1-213ENST00000512275 TM4SF5O14894 197 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 SELPP16109 830 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 COL8A1P27658 744 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 AFF1P51825 1210 aaKnown RBP9.44□□□□□ -0.9
RFC1-213ENST00000512275 CNGB1Q14028 1251 aaPredicted RBP9.44□□□□□ -0.9
RFC1-213ENST00000512275 ZNF746Q6NUN9 644 aaPredicted RBP9.44□□□□□ -0.9
RFC1-213ENST00000512275 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 CCDC81Q6ZN84 652 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms