RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 CDK8P49336 464 aa25.51■■□□□ 1.67
UBE2D3-229ENST00000510129 NBPF11Q86T75 865 aa25.51■■□□□ 1.67
UBE2D3-229ENST00000510129 M0R2C6 588 aa25.5■■□□□ 1.67
UBE2D3-229ENST00000510129 SHROOM1Q2M3G4 852 aaPredicted RBP25.5■■□□□ 1.67
UBE2D3-229ENST00000510129 DYNLL2Q96FJ2 89 aa25.5■■□□□ 1.67
UBE2D3-229ENST00000510129 ARHGEF10LQ9HCE6 1279 aa25.5■■□□□ 1.67
UBE2D3-229ENST00000510129 ROBO3Q96MS0 1386 aa25.49■■□□□ 1.67
UBE2D3-229ENST00000510129 SEPT2Q15019 361 aa25.49■■□□□ 1.67
UBE2D3-229ENST00000510129 ANKRD13CQ8N6S4 541 aa25.49■■□□□ 1.67
UBE2D3-229ENST00000510129 ARHGAP39Q9C0H5 1083 aa25.49■■□□□ 1.67
UBE2D3-229ENST00000510129 HELLSQ9NRZ9 838 aa25.49■■□□□ 1.67
UBE2D3-229ENST00000510129 EMILIN3Q9NT22 766 aa25.49■■□□□ 1.67
UBE2D3-229ENST00000510129 SLC3A2P08195 630 aaKnown RBP25.48■■□□□ 1.67
UBE2D3-229ENST00000510129 GUCY1A2P33402 732 aa25.48■■□□□ 1.67
UBE2D3-229ENST00000510129 RGS19P49795 217 aa25.48■■□□□ 1.67
UBE2D3-229ENST00000510129 SLC44A5Q8NCS7 719 aa25.48■■□□□ 1.67
UBE2D3-229ENST00000510129 ARMC5Q96C12 935 aa25.48■■□□□ 1.67
UBE2D3-229ENST00000510129 TRIM47Q96LD4 638 aa25.48■■□□□ 1.67
UBE2D3-229ENST00000510129 SRRDQ9UH36 339 aa25.48■■□□□ 1.67
UBE2D3-229ENST00000510129 CYP2D7A0A087X1C5 515 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 TRIM6-TRIM34B2RNG4 842 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L15C9J2P7 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L13C9JLJ4 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L11C9JVI0 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L18D6R9N7 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L22D6RA61 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L17D6RBQ6 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L19D6RCP7 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L20D6RJB6 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 USP17L24Q0WX57 530 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 SLC9C1Q4G0N8 1177 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 PLEKHM2Q8IWE5 1019 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 IFNL3Q8IZI9 196 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 KANSL2Q9H9L4 492 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 MKNK2Q9HBH9 465 aa25.47■■□□□ 1.67
UBE2D3-229ENST00000510129 MINDY4BA8MYZ0 360 aa25.46■■□□□ 1.67
UBE2D3-229ENST00000510129 CAP1Q01518 475 aa25.46■■□□□ 1.67
UBE2D3-229ENST00000510129 EVX2Q03828 476 aa25.46■■□□□ 1.67
UBE2D3-229ENST00000510129 ICA1Q05084 483 aa25.46■■□□□ 1.67
UBE2D3-229ENST00000510129 LPAR1Q92633 364 aa25.46■■□□□ 1.67
UBE2D3-229ENST00000510129 NAPBQ9H115 298 aa25.46■■□□□ 1.67
UBE2D3-229ENST00000510129 PTCH2Q9Y6C5 1203 aa25.46■■□□□ 1.67
UBE2D3-229ENST00000510129 MYPNQ86TC9 1320 aa25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 TNPO2O14787 897 aaKnown RBP25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 AKR1B1P15121 316 aa25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 HERVK_113P62684 666 aa25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 ZYXQ15942 572 aaKnown RBP25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 COA7Q96BR5 231 aa25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 SEC62Q99442 399 aaKnown RBP25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 MORF4L1Q9UBU8 362 aa25.45■■□□□ 1.66
UBE2D3-229ENST00000510129 VCAM1P19320 739 aa25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 MFAP1P55081 439 aaKnown RBP25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 MCMDC2Q4G0Z9 681 aa25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 RAET1EQ8TD07 263 aa25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 ACER1Q8TDN7 264 aa25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 RILPL2Q969X0 211 aa25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 EPB41L4AQ9HCS5 686 aaPredicted RBP25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 MGAMO43451 1857 aa25.44■■□□□ 1.66
UBE2D3-229ENST00000510129 HIP1O00291 1037 aa25.43■■□□□ 1.66
UBE2D3-229ENST00000510129 IRX6P78412 446 aaPredicted RBP25.43■■□□□ 1.66
UBE2D3-229ENST00000510129 PDE4BQ07343 736 aa25.43■■□□□ 1.66
UBE2D3-229ENST00000510129 CATSPERGQ6ZRH7 1159 aa25.43■■□□□ 1.66
UBE2D3-229ENST00000510129 GPRC5AQ8NFJ5 357 aa25.43■■□□□ 1.66
UBE2D3-229ENST00000510129 P2RX7Q99572 595 aaKnown RBP25.43■■□□□ 1.66
UBE2D3-229ENST00000510129 CTGFP29279 349 aa25.42■■□□□ 1.66
UBE2D3-229ENST00000510129 ZNF444Q8N0Y2 327 aaPredicted RBP25.42■■□□□ 1.66
UBE2D3-229ENST00000510129 TMX2Q9Y320 296 aa25.42■■□□□ 1.66
UBE2D3-229ENST00000510129 MLLT1Q03111 559 aaPredicted RBP25.41■■□□□ 1.66
UBE2D3-229ENST00000510129 ZSWIM8A7E2V4 1837 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 A0A1W2PRG0 241 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 SOX10P56693 466 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 CCNA1P78396 465 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 IRF5Q13568 498 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 LBX2Q6XYB7 198 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 SLAIN1Q8ND83 568 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 ZNF333Q96JL9 665 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 TMEM106CQ9BVX2 250 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 RPAP3Q9H6T3 665 aaPredicted RBP25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 GOPCQ9HD26 462 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 RABGAP1Q9Y3P9 1069 aa25.4■■□□□ 1.66
UBE2D3-229ENST00000510129 RASA1P20936 1047 aa25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 PPARAQ07869 468 aa25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 ALX1Q15699 326 aa25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 PPP4R3BQ5MIZ7 849 aa25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 CCAR1Q8IX12 1150 aaKnown RBP25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 VCPKMTQ9H867 229 aa25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 HOXC10Q9NYD6 342 aa25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 SYNPO2Q9UMS6 1093 aa25.39■■□□□ 1.66
UBE2D3-229ENST00000510129 EEF2P13639 858 aaKnown RBP25.38■■□□□ 1.65
UBE2D3-229ENST00000510129 MAPK4P31152 587 aa25.38■■□□□ 1.65
UBE2D3-229ENST00000510129 GRK4P32298 578 aa25.38■■□□□ 1.65
UBE2D3-229ENST00000510129 PRKCZQ05513 592 aa25.38■■□□□ 1.65
UBE2D3-229ENST00000510129 COG2Q14746 738 aa25.38■■□□□ 1.65
UBE2D3-229ENST00000510129 PXYLP1Q8TE99 480 aa25.38■■□□□ 1.65
UBE2D3-229ENST00000510129 SMIM22K7EJ46 135 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 WDR46O15213 610 aaKnown RBP25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 ECM2O94769 699 aaPredicted RBP25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 SDSP20132 328 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 ERVK-9P63128 1117 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 ERVK-24P63145 666 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms