RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 CCDC17Q96LX7 622 aa22.4■■□□□ 1.18
RPN1-208ENST00000497415 OSBPL3Q9H4L5 887 aa22.4■■□□□ 1.18
RPN1-208ENST00000497415 PATL2C9JE40 543 aaKnown RBP22.39■■□□□ 1.17
RPN1-208ENST00000497415 GCLCP48506 637 aaPredicted RBP22.39■■□□□ 1.17
RPN1-208ENST00000497415 IRX6P78412 446 aaPredicted RBP22.39■■□□□ 1.17
RPN1-208ENST00000497415 TMEM179Q6ZVK1 233 aa22.39■■□□□ 1.17
RPN1-208ENST00000497415 PLEKHM2Q8IWE5 1019 aa22.39■■□□□ 1.17
RPN1-208ENST00000497415 ACER1Q8TDN7 264 aa22.39■■□□□ 1.17
RPN1-208ENST00000497415 EPB41L4AQ9HCS5 686 aaPredicted RBP22.39■■□□□ 1.17
RPN1-208ENST00000497415 MPHOSPH10O00566 681 aaKnown RBP22.38■■□□□ 1.17
RPN1-208ENST00000497415 USP14P54578 494 aa22.38■■□□□ 1.17
RPN1-208ENST00000497415 FAM110CQ1W6H9 321 aa22.38■■□□□ 1.17
RPN1-208ENST00000497415 ARMC5Q96C12 935 aa22.38■■□□□ 1.17
RPN1-208ENST00000497415 FEZ1Q99689 392 aa22.38■■□□□ 1.17
RPN1-208ENST00000497415 SRRDQ9UH36 339 aa22.38■■□□□ 1.17
RPN1-208ENST00000497415 PTCH2Q9Y6C5 1203 aa22.38■■□□□ 1.17
RPN1-208ENST00000497415 ROBO3Q96MS0 1386 aa22.38■■□□□ 1.17
RPN1-208ENST00000497415 HTTP42858 3142 aa22.37■■□□□ 1.17
RPN1-208ENST00000497415 FMNL1O95466 1100 aaPredicted RBP22.37■■□□□ 1.17
RPN1-208ENST00000497415 AKR1B1P15121 316 aa22.37■■□□□ 1.17
RPN1-208ENST00000497415 HOXD10P28358 340 aa22.37■■□□□ 1.17
RPN1-208ENST00000497415 FCGRTP55899 365 aa22.37■■□□□ 1.17
RPN1-208ENST00000497415 IRX3P78415 501 aaPredicted RBP22.37■■□□□ 1.17
RPN1-208ENST00000497415 IFNL3Q8IZI9 196 aa22.37■■□□□ 1.17
RPN1-208ENST00000497415 ANKRD13CQ8N6S4 541 aa22.37■■□□□ 1.17
RPN1-208ENST00000497415 P2RX7Q99572 595 aaKnown RBP22.37■■□□□ 1.17
RPN1-208ENST00000497415 MORF4L1Q9UBU8 362 aa22.36■■□□□ 1.17
RPN1-208ENST00000497415 A0A1W2PRG0 241 aa22.35■■□□□ 1.17
RPN1-208ENST00000497415 ECM2O94769 699 aaPredicted RBP22.35■■□□□ 1.17
RPN1-208ENST00000497415 APPP05067 770 aa22.35■■□□□ 1.17
RPN1-208ENST00000497415 SOX10P56693 466 aa22.35■■□□□ 1.17
RPN1-208ENST00000497415 ZYXQ15942 572 aaKnown RBP22.35■■□□□ 1.17
RPN1-208ENST00000497415 SIAH1Q8IUQ4 282 aa22.35■■□□□ 1.17
RPN1-208ENST00000497415 GREB1LQ9C091 1923 aaPredicted RBP22.34■■□□□ 1.17
RPN1-208ENST00000497415 MINDY4BA8MYZ0 360 aa22.34■■□□□ 1.17
RPN1-208ENST00000497415 VCAM1P19320 739 aa22.34■■□□□ 1.17
RPN1-208ENST00000497415 TDO2P48775 406 aa22.34■■□□□ 1.17
RPN1-208ENST00000497415 HERVK_113P62684 666 aa22.34■■□□□ 1.17
RPN1-208ENST00000497415 NACAP1Q9BZK3 213 aa22.34■■□□□ 1.17
RPN1-208ENST00000497415 HELLSQ9NRZ9 838 aa22.34■■□□□ 1.17
RPN1-208ENST00000497415 DOCK3Q8IZD9 2030 aa22.34■■□□□ 1.17
RPN1-208ENST00000497415 USP17L15C9J2P7 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L13C9JLJ4 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L11C9JVI0 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L18D6R9N7 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L22D6RA61 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L17D6RBQ6 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L19D6RCP7 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L20D6RJB6 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 USP17L24Q0WX57 530 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 CATSPERGQ6ZRH7 1159 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 CCDC129Q6ZRS4 1044 aa22.33■■□□□ 1.17
RPN1-208ENST00000497415 MYPNQ86TC9 1320 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 TRIM6-TRIM34B2RNG4 842 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 FOXP2O15409 715 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 RASA1P20936 1047 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 ICA1Q05084 483 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 SLC9C1Q4G0N8 1177 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 NBPF11Q86T75 865 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 GTF3C2Q8WUA4 911 aaPredicted RBP22.32■■□□□ 1.16
RPN1-208ENST00000497415 ZNF333Q96JL9 665 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 ARHGEF10LQ9HCE6 1279 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 RBPJLQ9UBG7 517 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 TMX2Q9Y320 296 aa22.32■■□□□ 1.16
RPN1-208ENST00000497415 RBBP6Q7Z6E9 1792 aaKnown RBP22.31■■□□□ 1.16
RPN1-208ENST00000497415 PRKCZQ05513 592 aa22.31■■□□□ 1.16
RPN1-208ENST00000497415 POTEEQ6S8J3 1075 aa22.31■■□□□ 1.16
RPN1-208ENST00000497415 CLEC10AQ8IUN9 316 aa22.31■■□□□ 1.16
RPN1-208ENST00000497415 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.31■■□□□ 1.16
RPN1-208ENST00000497415 NAPBQ9H115 298 aa22.31■■□□□ 1.16
RPN1-208ENST00000497415 KANSL2Q9H9L4 492 aa22.31■■□□□ 1.16
RPN1-208ENST00000497415 TXNRD2Q9NNW7 524 aa22.31■■□□□ 1.16
RPN1-208ENST00000497415 GABRQQ9UN88 632 aa22.31■■□□□ 1.16
RPN1-208ENST00000497415 TNPO2O14787 897 aaKnown RBP22.3■■□□□ 1.16
RPN1-208ENST00000497415 MCMDC2Q4G0Z9 681 aa22.3■■□□□ 1.16
RPN1-208ENST00000497415 LBX2Q6XYB7 198 aa22.3■■□□□ 1.16
RPN1-208ENST00000497415 RILPL2Q969X0 211 aa22.3■■□□□ 1.16
RPN1-208ENST00000497415 FAM227BQ96M60 508 aa22.3■■□□□ 1.16
RPN1-208ENST00000497415 RPAP3Q9H6T3 665 aaPredicted RBP22.3■■□□□ 1.16
RPN1-208ENST00000497415 MKNK2Q9HBH9 465 aa22.3■■□□□ 1.16
RPN1-208ENST00000497415 A0A0D9SFI3 127 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 KIAA1755Q5JYT7 1200 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 STK11IPQ8N1F8 1099 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 GPRC5AQ8NFJ5 357 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 RAET1EQ8TD07 263 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 COA7Q96BR5 231 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 SH2D4AQ9H788 454 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 ZNF287Q9HBT7 754 aa22.29■■□□□ 1.16
RPN1-208ENST00000497415 RLFQ13129 1914 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 EEF2P13639 858 aaKnown RBP22.28■■□□□ 1.16
RPN1-208ENST00000497415 SDSP20132 328 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 PDE4AP27815 886 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 FLT3LGP49771 235 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 MLLT1Q03111 559 aaPredicted RBP22.28■■□□□ 1.16
RPN1-208ENST00000497415 PPARAQ07869 468 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 NMIQ13287 307 aaPredicted RBP22.28■■□□□ 1.16
RPN1-208ENST00000497415 IRF5Q13568 498 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 ALX1Q15699 326 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 VPS53Q5VIR6 699 aa22.28■■□□□ 1.16
RPN1-208ENST00000497415 SH3TC2Q8TF17 1288 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms