RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 ICA1Q05084 483 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 CLEC10AQ8IUN9 316 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 ESR2Q92731 530 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 MS4A4AQ96JQ5 239 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 USP26Q9BXU7 913 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 KRT23Q9C075 422 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 PTPRFP10586 1907 aa17.08■□□□□ 0.33
USP11-212ENST00000497179 LOC285556D6RIA3 1793 aa17.08■□□□□ 0.33
USP11-212ENST00000497179 A0A0G2JLL6 359 aaPredicted RBP17.08■□□□□ 0.32
USP11-212ENST00000497179 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
USP11-212ENST00000497179 HSPA4P34932 840 aa17.08■□□□□ 0.32
USP11-212ENST00000497179 SPP2Q13103 211 aa17.08■□□□□ 0.32
USP11-212ENST00000497179 PRRT2Q7Z6L0 340 aaPredicted RBP17.08■□□□□ 0.32
USP11-212ENST00000497179 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
USP11-212ENST00000497179 KCNB2Q92953 911 aa17.08■□□□□ 0.32
USP11-212ENST00000497179 ZIC5Q96T25 663 aa17.08■□□□□ 0.32
USP11-212ENST00000497179 TESPA1A2RU30 521 aaPredicted RBP17.07■□□□□ 0.32
USP11-212ENST00000497179 B4E1Z4 1266 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 KDM4AO75164 1064 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 CETPP11597 493 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 BACE1P56817 501 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 SREBF2Q12772 1141 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 TRDNQ13061 729 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 SIAH1Q8IUQ4 282 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
USP11-212ENST00000497179 ACER1Q8TDN7 264 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 CEP95Q96GE4 821 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 MTMR4Q9NYA4 1195 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 NYAP2Q9P242 653 aa17.07■□□□□ 0.32
USP11-212ENST00000497179 CCL15-CCL14A0A0B4J2E2 113 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 USP17L10C9JJH3 530 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 SEC24BO95487 1268 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
USP11-212ENST00000497179 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
USP11-212ENST00000497179 NOVP48745 357 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 MTMR2Q13614 643 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 MOGSQ13724 837 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 CCL15Q16663 113 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 SH3D19Q5HYK7 790 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 RALYLQ86SE5 291 aaKnown RBP17.06■□□□□ 0.32
USP11-212ENST00000497179 RASEFQ8IZ41 740 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 BRI3BPQ8WY22 251 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 SH2D4AQ9H788 454 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 IL17RBQ9NRM6 502 aa17.06■□□□□ 0.32
USP11-212ENST00000497179 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
USP11-212ENST00000497179 TM4SF4P48230 202 aa17.05■□□□□ 0.32
USP11-212ENST00000497179 INHBEP58166 350 aa17.05■□□□□ 0.32
USP11-212ENST00000497179 MB21D2Q8IYB1 491 aaPredicted RBP17.05■□□□□ 0.32
USP11-212ENST00000497179 FEZ1Q99689 392 aa17.05■□□□□ 0.32
USP11-212ENST00000497179 TMX2Q9Y320 296 aa17.05■□□□□ 0.32
USP11-212ENST00000497179 NMT2O60551 498 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 TTLL1O95922 423 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 MCCP23508 829 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 USP14P54578 494 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 HMGCS2P54868 508 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 KRT32Q14532 448 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 CYB5R4Q7L1T6 521 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 FASTKD5Q7L8L6 764 aaKnown RBP17.04■□□□□ 0.32
USP11-212ENST00000497179 PROCA1Q8NCQ7 364 aaPredicted RBP17.04■□□□□ 0.32
USP11-212ENST00000497179 MKL1Q969V6 931 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 C12orf42Q96LP6 360 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 ZSWIM5Q9P217 1185 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 SYNPO2Q9UMS6 1093 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 SNX14Q9Y5W7 946 aa17.04■□□□□ 0.32
USP11-212ENST00000497179 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
USP11-212ENST00000497179 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
USP11-212ENST00000497179 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
USP11-212ENST00000497179 JMYQ8N9B5 988 aa17.03■□□□□ 0.32
USP11-212ENST00000497179 PTPN18Q99952 460 aa17.03■□□□□ 0.32
USP11-212ENST00000497179 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
USP11-212ENST00000497179 CLIP2Q9UDT6 1046 aa17.03■□□□□ 0.32
USP11-212ENST00000497179 PCNTO95613 3336 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 IGF2BP3O00425 579 aaKnown RBP eCLIP17.02■□□□□ 0.32
USP11-212ENST00000497179 DGKZQ13574 1117 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 ZYXQ15942 572 aaKnown RBP17.02■□□□□ 0.32
USP11-212ENST00000497179 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 GADL1Q6ZQY3 521 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 ANKRD23Q86SG2 305 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 IFNL1Q8IU54 200 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 TTC14Q96N46 770 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.32
USP11-212ENST00000497179 ZKSCAN3Q9BRR0 538 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 ZCCHC17Q9NP64 241 aaKnown RBP17.02■□□□□ 0.32
USP11-212ENST00000497179 EMILIN3Q9NT22 766 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 STX8Q9UNK0 236 aa17.02■□□□□ 0.32
USP11-212ENST00000497179 MYH4Q9Y623 1939 aa17.02■□□□□ 0.31
USP11-212ENST00000497179 TNKSO95271 1327 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms